ggKbase home page

qs_7_scaffold_928_9

Organism: QS_7_UNK

megabin RP 50 / 55 MC: 45 BSCG 50 / 51 MC: 43 ASCG 38 / 38 MC: 38
Location: comp(6648..7688)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding domain-containing protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0YZV9_9CHLO similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 354.0
  • Bit_score: 305
  • Evalue 8.40e-80
Splicing factor 3B subunit 4 {ECO:0000313|EMBL:KIZ06294.1}; TaxID=145388 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium.;" source="Monorap similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 382.0
  • Bit_score: 307
  • Evalue 2.40e-80
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 115.0
  • Bit_score: 68
  • Evalue 3.70e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Monoraphidium neglectum → Monoraphidium → Sphaeropleales → Chlorophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1041
ATGGCATCTGCTGCCGGGGGCAGGGTGAGCGCGAGCGCGGGGGTGTCGCTGCTCTCGCAGCAGAGTGGCGTTGGCCAGTCGTCGAGAGCTGCGAGCCAGCACGCGACAGTGTACGTGGGCAACTTGGACTCTGCGGCGCACGAGGCGCTGGTGTACGAGCTTTTCCTACAGTTTGGGCCCGTTCTGAACGTGTACATGCCCAAAGACCGCGTGAGCGGCGCGCACCAGGGGTATGGCTTCGTGGAGTTTGCGTCTGAGCGCGATGCCGAGTATTCCATGAAGGTGGCCAACATGGTAAAGCTCTTCAACAAACCGCTCAAGGTGAACAAAGCCGCCTCCGACCGCCGCGAGACTGATGTCGGCGCCAACCTCTTCATTGGCAATCTCGACCCAAGCGTGGACGAGAAATTGCTTTACGACACCTTCAGTGCCTTCGGTCTCATCATCGGCACGCCCAAAGTCATGCGCGACGCCGACACTGGCCAGTCGAAGGGCTTCGGCTTTGTGAGCTTCGACTGCTTCGAAGCTTCGGATGCCGCCATCGACACTATGCACAACCAGTACCTGTGCAATCGGCCCATCACCGTCAACTACGCCCTCAAAAAGGGCAGCAAGCACGAGCGCCACGGCGACGCCGCCGAGCGCATGCTTGCCACAAACAGCAAGCAGCAGCAGAGCGGAACGCGTGATGGCAGCTCCGCTGCTGCGCAGCCCTCCTCGACGTCTTCTTCCTCTCGGCCACACCAGCAATTTGCCTCCACCATAAATTCTGCGCCGCCACCTCCTCCACCGTCCGACTTCTCTAATACTGCTGCTCACCAACAGTCGCCACAGCCGTCGAGTGCAATGCCCAACGGTGCGGGCGCAGCACCAGCACCGCCTCCAGCACCTCCTCCTCCGCCAGACGCCGCTGTTCCTGTTTCTGCTCCTGTTCCTCCTCCTCCTCCTCCTGGTCCTGATACTGCACATGCGCCAGCGGCCCCGCCTCCACCGCCTCCTCCGGATGAGGAGTACGATCAAGAGTCAAAGGGCAATCGTTGA
PROTEIN sequence
Length: 347
MASAAGGRVSASAGVSLLSQQSGVGQSSRAASQHATVYVGNLDSAAHEALVYELFLQFGPVLNVYMPKDRVSGAHQGYGFVEFASERDAEYSMKVANMVKLFNKPLKVNKAASDRRETDVGANLFIGNLDPSVDEKLLYDTFSAFGLIIGTPKVMRDADTGQSKGFGFVSFDCFEASDAAIDTMHNQYLCNRPITVNYALKKGSKHERHGDAAERMLATNSKQQQSGTRDGSSAAAQPSSTSSSSRPHQQFASTINSAPPPPPPSDFSNTAAHQQSPQPSSAMPNGAGAAPAPPPAPPPPPDAAVPVSAPVPPPPPPGPDTAHAPAAPPPPPPPDEEYDQESKGNR*