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QS_7_UNK

In projects: QS_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.83 Longest contig: 259.33 Kbp Bin length: 60.91 Mbp GC content: 61.58 %
Contigs count: 20203 Features count: 77924 rRNAs count: 9 tRNAs count: 725

Genome completeness

megabin RP 50 / 55 MC: 45 BSCG 50 / 51 MC: 43 ASCG 38 / 38 MC: 38
Displaying items 19601-19650 of 20203 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_7_scaffold_14696
Species: Natronomonas pharaonis (50%)
2 1520 bp 72.30 80.66 100.07
qs_7_scaffold_14850
Species: marine sediment metagenome (100%)
2 1505 bp 44.98 5.18 100.07
qs_7_scaffold_15407
Species: Flammeovirgaceae bacterium 311 (50%)
2 1454 bp 69.26 21.94 100.07
qs_7_scaffold_15530
Species: Haladaptatus paucihalophilus (50%)
2 1445 bp 62.35 9.00 100.07
qs_7_scaffold_6298
Species: Halococcus saccharolyticus (50%)
2 2854 bp 70.25 66.40 100.07
qs_7_scaffold_15931 3 1412 bp 51.06 5.52 100.07
qs_7_scaffold_15935
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1412 bp 68.48 8.29 100.07
qs_7_scaffold_16010
Species: Haloferax prahovense (50%)
2 1406 bp 67.43 21.41 100.07
qs_7_scaffold_16088
Species: Halobacterium sp. DL1 (50%)
2 1400 bp 51.43 7.14 100.07
qs_7_scaffold_16316
Species: Haloarcula vallismortis (50%)
2 1382 bp 68.89 7.16 100.07
qs_7_scaffold_26102
Species: Halococcus salifodinae (100%)
2 1373 bp 69.63 59.21 100.07
qs_7_scaffold_16494
Species: Haloferax prahovense (50%)
2 1367 bp 64.59 24.73 100.07
qs_7_scaffold_16994
Species: Halorubrum litoreum (50%)
2 1331 bp 67.62 76.18 100.08
qs_7_scaffold_17037
Species: Natronomonas pharaonis (100%)
2 1328 bp 73.57 15.51 100.08
qs_7_scaffold_17266
Species: Haloferax sp. Arc-Hr (50%)
2 1310 bp 63.51 10.31 100.08
qs_7_scaffold_17849
Species: Rhodothermus marinus (50%)
2 1271 bp 68.14 7.95 100.08
qs_7_scaffold_17933
Species: Halarchaeum acidiphilum (50%)
2 1265 bp 66.56 7.43 100.08
qs_7_scaffold_18107
Species: Haloarcula amylolytica (50%)
2 1253 bp 71.91 25.22 100.08
qs_7_scaffold_18334
Species: Hafnia paralvei (50%)
2 1238 bp 51.62 5.17 100.08
qs_7_scaffold_7864
Species: Halococcus salifodinae (100%)
2 2470 bp 62.71 7.13 100.08
qs_7_scaffold_31646
Species: Pseudonocardia dioxanivorans (50%)
2 1235 bp 64.78 9.72 100.08
qs_7_scaffold_18577
Species: Natronorubrum tibetense (50%)
2 1223 bp 59.93 6.05 100.08
qs_7_scaffold_18860 2 1205 bp 48.13 4.40 100.08
qs_7_scaffold_18919
Species: Oceanithermus profundus (50%)
2 1202 bp 69.80 9.73 100.08
qs_7_scaffold_33970
Species: Halosimplex carlsbadense (50%)
2 1175 bp 69.96 5.62 100.09
qs_7_scaffold_19431
Species: Halosimplex carlsbadense (100%)
2 1172 bp 72.87 14.51 100.09
qs_7_scaffold_19487 3 1169 bp 62.96 7.10 100.09
qs_7_scaffold_33761
Species: Halogeometricum pallidum (50%)
2 1160 bp 68.79 19.05 100.09
qs_7_scaffold_8746
Species: Halosimplex carlsbadense (50%)
2 2296 bp 67.94 62.59 100.09
qs_7_scaffold_8777
Species: Halococcus thailandensis (100%)
2 2290 bp 49.78 9.26 100.09
qs_7_scaffold_8916
Species: Haloferax larsenii (50%)
2 2266 bp 64.39 60.90 100.09
qs_7_scaffold_20167
Species: Haloquadratum walsbyi (100%)
2 1130 bp 63.72 6.11 100.09
qs_7_scaffold_20330
Species: Natronomonas moolapensis (66.67%)
3 1121 bp 70.03 62.27 100.09
qs_7_scaffold_20465
Species: Halostagnicola larsenii (50%)
2 1115 bp 62.06 5.20 100.09
qs_7_scaffold_20722
Species: Natrialba magadii (100%)
2 1100 bp 56.73 4.73 100.09
qs_7_scaffold_20904
Species: Halococcus salifodinae (50%)
2 1091 bp 63.98 19.89 100.09
qs_7_scaffold_21149
Species: Haloferax elongans (100%)
2 1079 bp 61.63 6.12 100.09
qs_7_scaffold_21334
Species: Halorubrum coriense (50%)
2 1070 bp 68.22 23.64 100.09
qs_7_scaffold_21670
Species: Natronomonas pharaonis (50%)
2 1055 bp 71.28 18.48 100.10
qs_7_scaffold_21910
Species: Halogranum salarium (100%)
2 1043 bp 71.24 42.47 100.10
qs_7_scaffold_5553
Species: Halobacterium sp. DL1 (50%)
2 3090 bp 71.88 55.21 100.10
qs_7_scaffold_10098
Species: Natrialba chahannaoensis (50%)
2 2059 bp 61.73 18.99 100.10
qs_7_scaffold_3800
Species: Halorubrum sp. J07HR59 (100%)
2 7199 bp 63.06 66.51 100.10
qs_7_scaffold_22444
Species: Haloarcula argentinensis (50%)
2 1019 bp 69.77 6.97 100.10
qs_7_scaffold_22509 2 1016 bp 63.98 5.71 100.10
qs_7_scaffold_22527
Species: Halomicrobium mukohataei (100%)
2 1016 bp 63.88 7.28 100.10
qs_7_scaffold_22602
Species: Halococcus thailandensis (100%)
2 1013 bp 58.84 7.21 100.10
qs_7_scaffold_22611
Species: Halomicrobium mukohataei (100%)
2 1013 bp 67.13 6.61 100.10
qs_7_scaffold_10326
Class: Halobacteria (66.67%)
3 2023 bp 69.70 23.53 100.10
qs_7_scaffold_22828
Species: Natronomonas moolapensis (100%)
2 1004 bp 64.64 44.12 100.10
Displaying items 19601-19650 of 20203 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.