ggKbase home page
Advanced Search
Search Help

QS_7_UNK

In projects: QS_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.83 Longest contig: 259.33 Kbp Bin length: 60.91 Mbp GC content: 61.58 %
Contigs count: 20203 Features count: 77924 rRNAs count: 9 tRNAs count: 725

Genome completeness

megabin RP 50 / 55 MC: 45 BSCG 50 / 51 MC: 43 ASCG 38 / 38 MC: 38
Displaying items 401-450 of 20203 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_7_scaffold_14862
Species: Halococcus hamelinensis (100%)
3 2927 bp 63.20 8.27 100.24
qs_7_scaffold_12942
Species: R_Acidobacteria_67_21 (50%)
2 1688 bp 69.96 14.99 100.24
qs_7_scaffold_17882
Species: Haladaptatus paucihalophilus (50%)
2 1269 bp 72.26 18.68 100.24
qs_7_scaffold_12876
Species: Haloterrigena limicola (75%)
4 1697 bp 70.83 13.38 100.24
qs_7_scaffold_17656
Species: Rhodothermus marinus (100%)
2 1284 bp 67.52 10.51 100.23
qs_7_scaffold_5811
Species: Clostridium cellulovorans (50%)
2 2999 bp 51.28 9.94 100.23
qs_7_scaffold_17561
Species: Halococcus salifodinae (50%)
2 1290 bp 64.65 17.44 100.23
qs_7_scaffold_19143
Order: Halobacteriales (100%)
3 1721 bp 73.85 6.91 100.23
qs_7_scaffold_9368
Domain: Bacteria (66.67%)
3 2179 bp 53.14 8.03 100.23
qs_7_scaffold_27289
Species: Natronomonas moolapensis (50%)
2 1317 bp 71.68 59.23 100.23
qs_7_scaffold_17176
Species: Natrialba magadii (50%)
2 1317 bp 71.91 81.93 100.23
qs_7_scaffold_9262
Species: Halarchaeum acidiphilum (100%)
3 2200 bp 58.50 7.64 100.23
qs_7_scaffold_12318
Species: Haloarcula japonica (50%)
2 1763 bp 68.12 7.15 100.23
qs_7_scaffold_16976
Species: Haloferax mucosum (50%)
2 1332 bp 67.04 16.22 100.23
qs_7_scaffold_7756
Species: Halosimplex carlsbadense (77.78%)
9 4948 bp 69.18 15.68 100.22
qs_7_scaffold_16641
Species: Haloarcula amylolytica (50%)
2 1356 bp 60.25 8.55 100.22
qs_7_scaffold_16560
Species: RBG_19FT_COMBO_Nitrospirae_42_15_curated (50%)
2 1362 bp 51.69 11.53 100.22
qs_7_scaffold_16513
Species: Halorhabdus utahensis (100%)
2 1365 bp 69.01 9.16 100.22
qs_7_scaffold_30571
Species: Halococcus hamelinensis (50%)
2 1371 bp 69.07 6.71 100.22
qs_7_scaffold_16421
Species: Halobacterium sp. DL1 (100%)
3 1374 bp 65.36 7.86 100.22
qs_7_scaffold_21205
Species: Salinibacter ruber (100%)
2 1844 bp 66.49 17.90 100.22
qs_7_scaffold_16267
Species: Natronomonas moolapensis (100%)
2 1386 bp 66.45 63.85 100.22
qs_7_scaffold_22735
Species: Natronomonas moolapensis (50%)
2 1389 bp 71.92 78.55 100.22
qs_7_scaffold_16182
Species: Halopiger xanaduensis (50%)
2 1392 bp 73.28 10.13 100.22
qs_7_scaffold_16151
Species: Natronomonas pharaonis (50%)
2 1395 bp 71.83 52.11 100.22
qs_7_scaffold_11507
Species: Halomicrobium mukohataei (100%)
2 1862 bp 67.24 7.57 100.22
qs_7_scaffold_16039
Species: Halococcus salifodinae (100%)
2 1404 bp 67.38 7.69 100.21
qs_7_scaffold_13265
Species: Haloarcula hispanica (50%)
2 3281 bp 66.78 8.59 100.21
qs_7_scaffold_11368
Species: Natronomonas pharaonis (50%)
2 1880 bp 67.82 15.96 100.21
qs_7_scaffold_10915
Species: uncultured haloarchaeon (50%)
2 1946 bp 64.08 15.52 100.21
qs_7_scaffold_10845
Species: Haloarcula californiae (50%)
2 1955 bp 68.29 23.17 100.21
qs_7_scaffold_8118
Species: Natronomonas moolapensis (50%)
2 2955 bp 68.73 22.04 100.20
qs_7_scaffold_15111
Species: Haloferax larsenii (50%)
2 1482 bp 54.45 5.60 100.20
qs_7_scaffold_14876
Species: Natronomonas pharaonis (50%)
2 1503 bp 74.85 48.24 100.20
qs_7_scaffold_22832
Species: Natronomonas pharaonis (50%)
2 1003 bp 73.18 13.66 100.20
qs_7_scaffold_10364
Class: Halobacteria (100%)
3 2018 bp 72.94 9.22 100.20
qs_7_scaffold_22702
Species: Kordia algicida (50%)
2 1009 bp 56.39 4.66 100.20
qs_7_scaffold_22620
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1012 bp 67.98 10.08 100.20
qs_7_scaffold_14688
Species: Halosimplex carlsbadense (50%)
2 1521 bp 71.47 21.43 100.20
qs_7_scaffold_22545
Species: Natronomonas pharaonis (50%)
2 1015 bp 72.71 77.14 100.20
qs_7_scaffold_22551
Species: Halostagnicola sp. A56 (50%)
2 1015 bp 70.64 93.60 100.20
qs_7_scaffold_22416
Species: Halorhabdus utahensis (50%)
2 1021 bp 74.63 15.57 100.20
qs_7_scaffold_22426 3 1021 bp 64.35 16.94 100.20
qs_7_scaffold_22268
Species: S_OP1_64_32 (50%)
2 1027 bp 65.04 6.52 100.20
qs_7_scaffold_22187
Species: Halosimplex carlsbadense (50%)
2 1030 bp 70.78 16.41 100.19
qs_7_scaffold_14393
Species: Halalkalicoccus jeotgali (50%)
2 1548 bp 69.12 51.74 100.19
qs_7_scaffold_14345
Order: Halobacteriales (66.67%)
3 1551 bp 67.63 24.89 100.19
qs_7_scaffold_22004
Species: Halogeometricum borinquense (50%)
2 1039 bp 65.83 6.93 100.19
qs_7_scaffold_21871
Species: Haloarcula marismortui (50%)
2 1045 bp 56.94 5.07 100.19
qs_7_scaffold_21877
Species: Haloferax larsenii (50%)
2 1045 bp 58.47 6.51 100.19
Displaying items 401-450 of 20203 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.