ggKbase home page

qs_9_scaffold_1878_18

Organism: QS_9_UNK

megabin RP 51 / 55 MC: 48 BSCG 45 / 51 MC: 39 ASCG 38 / 38 MC: 38
Location: 13504..14061

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=797114 species="Ar similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 185.0
  • Bit_score: 281
  • Evalue 7.40e-73
2'-5' RNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D661_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 185.0
  • Bit_score: 281
  • Evalue 5.30e-73
ligT; 2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 187.0
  • Bit_score: 254
  • Evalue 2.60e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 558
ATGGGCAAGCGACTGTTCGTCAGCGTCGACCTCGACGGCCTGGCCGAGGACGTCGCGGCCGTCCAGGAACGGTTCGCGGACGCCTCCGGCCTCCGGTTCACCGACCCCGAGCAGGCCCACGTCACGCTGAAGTTCCTCGGCGACACCGACGAAGACCGGGTCCGCTCCGTCTGCGAGGAACTCGACGCAGCGGTCAGGGACGCCGGCGTCGACCCCTTCGAGATGACCGTCTCCGGACTCGGCGTGTTCCCGAGCCTCGATTACATCAGCGTCGTCTGGGTCGGTGTCGACGAGGGGAGCCACGAACTGACCGCGCTCCACGAGGCCATCGAGGAGCGGACCGTCGCGATGGGCTTCGACGCGGCGGACCACGAGTTCACTCCCCACGCCACTATCGCGCGGATGGACCACGCCGGCGGGAAGGAACTCGTCCGGGAACGGGTCCACGAGGACGACCCCACGGTGGGACGGGTCGCCGTCGATGAAGTCAGGCTGAAAGAGAGCGTCCTCGGGAGCGACGGGTCGACGTACTCGACCGTCGAACGGTTCGAACTCTGA
PROTEIN sequence
Length: 186
MGKRLFVSVDLDGLAEDVAAVQERFADASGLRFTDPEQAHVTLKFLGDTDEDRVRSVCEELDAAVRDAGVDPFEMTVSGLGVFPSLDYISVVWVGVDEGSHELTALHEAIEERTVAMGFDAADHEFTPHATIARMDHAGGKELVRERVHEDDPTVGRVAVDEVRLKESVLGSDGSTYSTVERFEL*