ggKbase home page
Advanced Search
Search Help

QS_9_UNK

In projects: QS_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 24.01 Longest contig: 255.34 Kbp Bin length: 53.74 Mbp GC content: 62.24 %
Contigs count: 17166 Features count: 68256 rRNAs count: 6 tRNAs count: 714

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 45 / 51 MC: 39 ASCG 38 / 38 MC: 38
Displaying items 201-250 of 17166 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_9_scaffold_10881
Species: Halosimplex carlsbadense (100%)
2 1868 bp 66.06 7.55 100.70
qs_9_scaffold_27578
Species: Haladaptatus paucihalophilus (66.67%)
3 1311 bp 60.49 28.60 100.69
qs_9_scaffold_4747
Domain: Bacteria (83.33%)
6 5307 bp 62.56 11.74 100.68
qs_9_scaffold_12819
Species: Halorubrum hochstenium (66.67%)
3 2825 bp 66.58 77.27 100.67
qs_9_scaffold_7651
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
3 2545 bp 71.67 7.27 100.67
qs_9_scaffold_31774
Species: Salinibacter ruber (50%)
2 1055 bp 61.14 26.64 100.66
qs_9_scaffold_19697
Species: Halalkalicoccus jeotgali (100%)
2 1055 bp 66.35 7.87 100.66
qs_9_scaffold_6180
Class: Halobacteria (100%)
3 3025 bp 67.50 8.50 100.66
qs_9_scaffold_14584
Species: Salinibacter ruber (100%)
2 1967 bp 65.48 42.55 100.66
qs_9_scaffold_17542
Species: Halococcus hamelinensis (50%)
4 2140 bp 55.05 52.15 100.65
qs_9_scaffold_13869
Order: Halobacteriales (66.67%)
3 2155 bp 70.90 8.60 100.65
qs_9_scaffold_15695
Class: Halobacteria (60%)
5 2176 bp 50.60 9.47 100.64
qs_9_scaffold_14661
Order: Natrialbales (66.67%)
3 1407 bp 61.19 7.60 100.64
qs_9_scaffold_16499
Species: Halococcus thailandensis (100%)
2 1258 bp 56.12 45.23 100.64
qs_9_scaffold_15685
Species: Haloarcula argentinensis (66.67%)
3 2379 bp 61.20 6.73 100.63
qs_9_scaffold_9687 8 2069 bp 47.95 6.52 100.63
qs_9_scaffold_11366
Species: halophilic archaeon J07HX64 (100%)
3 1798 bp 72.75 22.86 100.61
qs_9_scaffold_24526
Order: Halobacteriales (66.67%)
3 2848 bp 64.96 25.43 100.60
qs_9_scaffold_20522
Species: Halococcus thailandensis (50%)
2 1008 bp 68.15 8.53 100.59
qs_9_scaffold_20530
Genus: Halococcus (66.67%)
3 1008 bp 68.15 21.13 100.59
qs_9_scaffold_20531
Species: Halococcus saccharolyticus (66.67%)
3 1008 bp 69.44 43.75 100.59
qs_9_scaffold_8331 3 3394 bp 53.77 5.92 100.59
qs_9_scaffold_14446
Species: Natronomonas moolapensis (50%)
6 1903 bp 67.47 49.71 100.58
qs_9_scaffold_16982
Domain: Bacteria (66.67%)
3 1223 bp 67.95 8.09 100.57
qs_9_scaffold_14698
Species: Rhodothermus marinus (100%)
2 1405 bp 66.26 8.68 100.57
qs_9_scaffold_16723
Species: Natrinema gari (50%)
2 1241 bp 60.35 11.60 100.56
qs_9_scaffold_7877
Class: Halobacteria (71.43%)
7 2488 bp 63.34 10.61 100.56
qs_9_scaffold_7878
Species: Natronomonas moolapensis (50%)
4 2488 bp 69.21 42.56 100.56
qs_9_scaffold_16697
Species: Halococcus salifodinae (50%)
2 1244 bp 67.52 26.37 100.56
qs_9_scaffold_9801
Species: Halococcus salifodinae (50%)
4 2682 bp 68.75 47.80 100.56
qs_9_scaffold_16451 3 1262 bp 51.11 7.61 100.55
qs_9_scaffold_16457
Species: Halococcus saccharolyticus (50%)
2 1262 bp 67.59 49.68 100.55
qs_9_scaffold_8175
Species: Salinibacter ruber (50%)
2 3100 bp 65.13 37.84 100.55
qs_9_scaffold_18867
Species: Natronomonas pharaonis (50%)
2 1101 bp 71.21 24.98 100.55
qs_9_scaffold_8267 3 2387 bp 58.44 6.54 100.55
qs_9_scaffold_6354
Species: halophilic archaeon DL31 (50%)
4 2954 bp 72.75 41.40 100.54
qs_9_scaffold_13819
Species: Halomicrobium mukohataei (50%)
2 1495 bp 60.47 7.16 100.54
qs_9_scaffold_12156
Species: Natronomonas moolapensis (100%)
2 1686 bp 72.60 33.21 100.53
qs_9_scaffold_13490
Species: Chroococcales cyanobacterium CENA595 (50%)
2 1531 bp 65.71 9.14 100.52
qs_9_scaffold_18076
Species: Halococcus hamelinensis (66.67%)
3 1149 bp 63.36 16.80 100.52
qs_9_scaffold_15127 3 1367 bp 56.04 6.14 100.51
qs_9_scaffold_13079
Species: Halosimplex carlsbadense (50%)
2 1576 bp 68.15 10.03 100.51
qs_9_scaffold_1933
Species: Halobacterium sp. DL1 (100%)
6 6758 bp 60.52 13.67 100.50
qs_9_scaffold_17337
Species: Natrinema altunense (50%)
2 1197 bp 50.38 6.27 100.50
qs_9_scaffold_5285
Order: Halobacteriales (100%)
3 3418 bp 65.04 11.23 100.50
qs_9_scaffold_17078
Domain: Bacteria (100%)
3 1215 bp 64.28 5.60 100.49
qs_9_scaffold_6661
Species: Halococcus morrhuae (50%)
2 2845 bp 65.87 76.70 100.49
qs_9_scaffold_12426
Class: Halobacteria (66.67%)
3 1651 bp 73.65 12.78 100.49
qs_9_scaffold_9437
Species: Haloarcula amylolytica (50%)
2 2120 bp 69.86 7.74 100.47
qs_9_scaffold_16230
Species: Halosimplex carlsbadense (50%)
2 1278 bp 74.73 27.78 100.47
Displaying items 201-250 of 17166 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.