ggKbase home page
Advanced Search
Search Help

QS_9_UNK

In projects: QS_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 24.01 Longest contig: 255.34 Kbp Bin length: 53.74 Mbp GC content: 62.24 %
Contigs count: 17166 Features count: 68256 rRNAs count: 6 tRNAs count: 714

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 45 / 51 MC: 39 ASCG 38 / 38 MC: 38
Displaying items 16801-16850 of 17166 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_9_scaffold_17704 1 1172 bp 55.97 5.63 38.14
qs_9_scaffold_12865 3 1600 bp 43.19 5.50 38.06
qs_9_scaffold_13949
Species: BJP_IG2157_Clostridiales_52_13 (50%)
2 2139 bp 64.14 30.90 38.01
qs_9_scaffold_14806
Class: Halobacteria (50%)
4 2566 bp 59.31 34.26 38.00
qs_9_scaffold_7035
Domain: Bacteria (50%)
8 3417 bp 55.49 66.55 37.96
qs_9_scaffold_26742
Species: Halosimplex carlsbadense (50%)
2 1478 bp 65.56 14.68 37.96
qs_9_scaffold_20463
Species: Halococcus thailandensis (100%)
1 1012 bp 58.00 67.59 37.94
qs_9_scaffold_4614
Class: Halobacteria (50%)
4 4649 bp 65.80 30.42 37.94
qs_9_scaffold_16399
Species: Natronomonas pharaonis (50%)
2 1266 bp 66.51 23.46 37.91
qs_9_scaffold_17901 2 1721 bp 53.69 7.84 37.83
qs_9_scaffold_21872 1 1380 bp 54.28 22.17 37.83
qs_9_scaffold_15828 2 1309 bp 49.81 5.19 37.82
qs_9_scaffold_15735
Species: Natronomonas pharaonis (50%)
2 1317 bp 68.87 54.06 37.81
qs_9_scaffold_11095 3 1835 bp 46.43 33.90 37.77
qs_9_scaffold_19791
Class: Halobacteria (66.67%)
3 1049 bp 59.10 6.10 37.75
qs_9_scaffold_16632
Species: Salinibacter ruber (50%)
2 1248 bp 63.38 19.15 37.74
qs_9_scaffold_18095
Species: Salinibacter ruber (100%)
1 2132 bp 58.91 6.71 37.71
qs_9_scaffold_13892
Species: Salinibacter ruber (100%)
2 1488 bp 62.77 14.85 37.70
qs_9_scaffold_15405 2 1345 bp 51.82 25.87 37.70
qs_9_scaffold_8789 3 2266 bp 55.25 9.53 37.60
qs_9_scaffold_16887
Species: Bacillus thuringiensis (50%)
2 2979 bp 58.34 42.27 37.56
qs_9_scaffold_16129 2 1286 bp 56.61 9.41 37.56
qs_9_scaffold_10629 3 1910 bp 42.67 6.86 37.54
qs_9_scaffold_19542
Species: Halorubrum aidingense (100%)
1 1064 bp 55.64 6.67 37.50
qs_9_scaffold_26014
Species: Natronolimnobius innermongolicus (50%)
2 1578 bp 60.33 22.43 37.45
qs_9_scaffold_19642
Species: uncultured archaeon A07HB70 (100%)
1 1058 bp 53.97 8.88 37.43
qs_9_scaffold_11868
Species: Haladaptatus paucihalophilus (50%)
2 1725 bp 68.29 23.71 37.39
qs_9_scaffold_15947
Species: Halococcus thailandensis (50%)
2 1300 bp 52.23 18.85 37.38
qs_9_scaffold_11220
Species: Halococcus thailandensis (66.67%)
3 1816 bp 59.64 19.38 37.33
qs_9_scaffold_11512 2 1776 bp 51.18 6.42 37.33
qs_9_scaffold_18208
Species: Halococcus salifodinae (100%)
1 1142 bp 53.42 29.33 37.30
qs_9_scaffold_18569 2 1119 bp 67.65 15.28 37.27
qs_9_scaffold_9804
Species: Halorubrum sp. J07HR59 (50%)
2 2050 bp 54.78 7.80 37.17
qs_9_scaffold_12185 2 1683 bp 53.89 27.21 37.08
qs_9_scaffold_14565 2 1417 bp 53.92 5.58 37.05
qs_9_scaffold_19737
Species: Rhodothermus marinus (50%)
2 1053 bp 64.20 12.63 37.04
qs_9_scaffold_17006
Species: Halococcus thailandensis (50%)
2 1221 bp 60.03 7.45 36.86
qs_9_scaffold_12792
Phylum: Euryarchaeota (60%)
5 4668 bp 60.03 42.52 36.85
qs_9_scaffold_13044 3 3071 bp 59.52 5.01 36.83
qs_9_scaffold_8715 1 2281 bp 45.73 11.35 36.83
qs_9_scaffold_16817
Species: Natronomonas moolapensis (50%)
2 1233 bp 68.53 19.63 36.74
qs_9_scaffold_17016
Species: Halorubrum coriense (100%)
1 1220 bp 64.75 28.11 36.64
qs_9_scaffold_18254 2 1139 bp 51.98 16.24 36.61
qs_9_scaffold_18136
Genus: Halococcus (50%)
4 2878 bp 64.59 29.57 36.59
qs_9_scaffold_26890
Species: Haloferax prahovense (50%)
2 1209 bp 70.39 15.47 36.48
qs_9_scaffold_17470
Species: Salinibacter ruber (100%)
2 1187 bp 63.10 23.25 36.39
qs_9_scaffold_24762
Species: Natronomonas pharaonis (50%)
2 1715 bp 53.47 13.18 36.38
qs_9_scaffold_12950
Species: Chlamydia sp. 'Rubis' (100%)
1 1592 bp 60.30 10.05 36.37
qs_9_scaffold_18985
Species: Halorubrum coriense (100%)
1 2023 bp 64.90 19.33 36.33
qs_9_scaffold_19932
Species: Halorubrum californiense (50%)
2 1041 bp 64.84 21.81 36.31
Displaying items 16801-16850 of 17166 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.