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sw_4_scaffold_1606_1

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: 3..1325

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4DQM2_BRARP similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 438.0
  • Bit_score: 312
  • Evalue 8.70e-82
BnaA05g35890D protein {ECO:0000313|EMBL:CDY61554.1}; TaxID=3708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 441.0
  • Bit_score: 312
  • Evalue 7.20e-82
Os11g0298400; K14799 pre-rRNA-processing protein TSR1 similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 440.0
  • Bit_score: 307
  • Evalue 8.80e-81

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Taxonomy

Brassica napus → Brassica → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1323
CATCAACGTCTGCATGACCTTTACGATGGTGAGCAGAGCGAGGAAGGTATGGCAGATGCTGTAAGTGGAGAGCTTGACGATGAGCTCATGTCCGACAATGCACTAGAAAGAAGAGCTGTATCCGATGCATTCAATGCAATGGAGCAAGAAAGAGAGGATGACACCGAGACGATCAATGGTGGCGCATCGATCGTTGGTGATGCTAGTGACGATGCTCTGCTCGAAGATGATAAAGATAACGCCGAAGAGCATGAGAGAGAGAAGACTGAAAACGAGCGCCGAAAGCGCGAGCGAGAGATCATGGAAGATGCAGAATTCCCAGATGAAGTTGAAACTCCCGAAGATCAACCTGCACGCCGGCGATTCTCCAAATACCGCGCCTTACGCTCTTTTCGAACAACCCCGTGGAATGCAAGAGCAGACCTTCCACAGGAGTACAACAAGATCTTTGCATTTGATAGCCTTCGACGGGCTCAGAAATTAGCTGCTGAAGAACAACGAGAGCGATCTGAGCGGGATAATGCCGCACCCGTTGGAAGCTTTATTCGTCTTGTCCTTGAGGGATTGTCAACTGATGTCGCTCAAGAGGTTGTTGCTCAGAACGCACCTCTTACAGCACTTGGGTTGCTTTTGCATGAAGGAAAGCTATCTGTGAACCACTATCGCATCTCGCTTTATGAGGACAGCGCCGTCACGCCCAATACTTGCGAGTTTGGAGACGACCATGAGAATGTGAATCAGCCGCGTGGGCTTCGTAGTAAAGACGAAATCGTGGTTGAAGCGGGCTTTCGACGGCACAGAGTGCGACCGATTTATTCCACTGATGATACTGGCGACAAGCACAAGTTTTTGCGCTATCTTCATGCGGGTGTGCCGGCAGTTGCAAGCTTCTACAGCCCCATCATGTATCCATCAGCCCCAGGTCTTGTTTACACCCGAGTCGGCGTCTCTGCAAGTGACAACGGAGAGGCGATGGGCGGAAACTATTATGGTCAGGAGACATTGGTTGGCACTGGGCGTGTTGCTGGCAACGATCCTTGGCGTGTGGTTGTGAAGCGAGCCATCTTAACTGGCATCCCAACCAAAGTGCAAAAGAAGAAAGCTTCTGTGCGCAGTATGTTCTACTCGCCCGATGACGTGCGATACTTCAAACCTGTTGATCTCTTCACCAAGCACGGGAAGCATGGGAGCATCAAGGAACCTGTTGGAACGCACGGCGCAATGAAGTGCCGCTTCAACGCACCGGTGCATCAACACGATACAGTGTGCCTGGCACTGTACAAGAGGATCTTTCCGCCGTATCCAGTCCAGATCTCTCAATAG
PROTEIN sequence
Length: 441
HQRLHDLYDGEQSEEGMADAVSGELDDELMSDNALERRAVSDAFNAMEQEREDDTETINGGASIVGDASDDALLEDDKDNAEEHEREKTENERRKREREIMEDAEFPDEVETPEDQPARRRFSKYRALRSFRTTPWNARADLPQEYNKIFAFDSLRRAQKLAAEEQRERSERDNAAPVGSFIRLVLEGLSTDVAQEVVAQNAPLTALGLLLHEGKLSVNHYRISLYEDSAVTPNTCEFGDDHENVNQPRGLRSKDEIVVEAGFRRHRVRPIYSTDDTGDKHKFLRYLHAGVPAVASFYSPIMYPSAPGLVYTRVGVSASDNGEAMGGNYYGQETLVGTGRVAGNDPWRVVVKRAILTGIPTKVQKKKASVRSMFYSPDDVRYFKPVDLFTKHGKHGSIKEPVGTHGAMKCRFNAPVHQHDTVCLALYKRIFPPYPVQISQ*