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sw_4_scaffold_2160_11

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: 11853..13655

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=309807 species="Bacteria; Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 614.0
  • Bit_score: 643
  • Evalue 3.20e-181
transcription-repair coupling factor n=1 Tax=Salisaeta longa RepID=UPI0003B5D585 similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 602.0
  • Bit_score: 649
  • Evalue 2.40e-183
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 614.0
  • Bit_score: 643
  • Evalue 6.30e-182

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1803
GTGGCTCTCCAGGACATCTACCGCCGCGTCGCCGGCGCCGCGCTCACGAGCGAACTGCGCGACTGGCGCACCGGCGCGGCTCCGGGTGACGCGCTCCGCATCGCCGGCGCCGCCGGCTCGCTGCCGGCCTTTTTGCTGCGTGCGCTCTTGGACGAAGACGGGCCCAGTGGCAACGGCCAGCCCGTGCCCCTCCTTGCCGTCGCGCCTGACGAAGACGCCGCCGCCTACCTGCGGAGCGACCTCGACGCGCTGCTCGGCGAGAAAAGCGCCGCCGCGGTCCTCCACTTTCCCGCCACCGGACAAACGCCCTACGACGACGAGCAAATCGCCTCCTCCGCCCCGCTGACGGCCCGCGCCGACGTGCTCCAGCAGCTCACCGGGGGCTTCGGCGGGATCGTCGTCACCAGCGCGGAGGCCCTCTTCGAAAAAGTGCCCCCGCCCGAGGGCGTCCAGCAGGACACCCTGCGCATCGAGCGCGGCCAGACGCTCGCGCCGGAGCGACTGGTCGAGCGGCTCAACGGGCAGGGCTTCTCGCGGGTCGAGTTCGTCGAAGAACCCGGCCACCTCGCGCGCCGCGGCGGCATCCTCGACGTGTTTCCCTTCTCTGGCGAGTACCCGGTGCGCATCGAGTTCTTCGGCGACGAAATCGACGGCCTCCGCGAGTTCGACCCGCACACGCAGCGCAGCGTCAGCCGCCTGACCGAGACGCGCCTCGTGCCAAACCTGGAGCGCGAGGATGAGGAGGGCGAAAGCGGTCCGCGCGTCCCGTTTTTCGACTACCTGCCCGACGCCGCCCTCGCGGCCACCTTCGACGAAGAGCGCCTGCTCGAAGAGGCCGCCGAGCGCTTTTCCGACGCCGAGAAGCGCCACGCGGAAGCGCTGGGCGAACGCGAGAACGGCGGCGAGCCGCTGCCCGCTCCCGAGGCGCGCTATTTGCCCGCTGACGCGCTCCAGACGCAGATCGAGCGTCCCCCGCGCCTGCTCTTCGGCACCTTTACCGGCGATGTAGAAGCGGAGACGCTCGAAGCAAATGCACACTCGCAGCCCGCCTTCGGGCGCAGCATCGAGCACGTCAGCGCGAAGCTGACCGAGAACGACAACAAGGGCTGGCAAAACTTCCTGCTGTGCGACAGTCAGGGGCAGGTCACGCGCCTGCGCGAGCTGTTGGAGGGCGACGTGGACGCCGGACGGGCGCGCATCACCGCCGAGGCGAGCCTGCACGAAGGCTTCGAGCTTCCGAGCGCTGAACTGGCCGTTTATACCGACCATCAGATCTTCGGGCGCCACCACCGCCCCTCCACCCAGAAGAGCCAGCCGACCGCCGGCGGCCTCTCGCTGCGCGACATTCAGAACCTCACGCCGGGCGACTTCGTGGTGCACGTCGATTACGGCATCGGCAAGTTCGCGGGCCTGCGCGAGATCACCGTGCGCGAAAAGAAGCAGGAAGCCGTGCGCCTGCGGTTTCGGAACGAAGACACGCTCTTCGTCAACACCAGCGCGCTGCACAAGCTCAGCAAGTACAAGAGCGAGGAGGGCCACCAGCCGCGCCTGACGAACCTGAACTCCGACCAGTGGGCAAAGAAGAAGGCCAAGACGAAGGGGCAGGTCAAGGACATCGCCCGCGACCTGATCGAGCTGTATGCGAAAAGAAAGGCTGCCACGGGCCACGCCTTCGAGAAAGACACCGTCTGGCAGCGCGAGATGGAGGCCTCCTTCGCCTTCGAGGACACGCCCGACCAGGCGAAAGCCACGCGCGAGGTCAAGGAAGACATGGAGGCGCGCTCGCCGATGGACCGGCTCGTC
PROTEIN sequence
Length: 601
VALQDIYRRVAGAALTSELRDWRTGAAPGDALRIAGAAGSLPAFLLRALLDEDGPSGNGQPVPLLAVAPDEDAAAYLRSDLDALLGEKSAAAVLHFPATGQTPYDDEQIASSAPLTARADVLQQLTGGFGGIVVTSAEALFEKVPPPEGVQQDTLRIERGQTLAPERLVERLNGQGFSRVEFVEEPGHLARRGGILDVFPFSGEYPVRIEFFGDEIDGLREFDPHTQRSVSRLTETRLVPNLEREDEEGESGPRVPFFDYLPDAALAATFDEERLLEEAAERFSDAEKRHAEALGERENGGEPLPAPEARYLPADALQTQIERPPRLLFGTFTGDVEAETLEANAHSQPAFGRSIEHVSAKLTENDNKGWQNFLLCDSQGQVTRLRELLEGDVDAGRARITAEASLHEGFELPSAELAVYTDHQIFGRHHRPSTQKSQPTAGGLSLRDIQNLTPGDFVVHVDYGIGKFAGLREITVREKKQEAVRLRFRNEDTLFVNTSALHKLSKYKSEEGHQPRLTNLNSDQWAKKKAKTKGQVKDIARDLIELYAKRKAATGHAFEKDTVWQREMEASFAFEDTPDQAKATREVKEDMEARSPMDRLV