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sw_5_scaffold_406_1

Organism: SW_5_UNK

megabin RP 47 / 55 MC: 39 BSCG 41 / 51 MC: 33 ASCG 38 / 38 MC: 37
Location: comp(1..3126)

Top 3 Functional Annotations

Value Algorithm Source
Protein C50F7.5 n=1 Tax=Caenorhabditis elegans RepID=Q18751_CAEEL similarity UNIREF
DB: UNIREF100
  • Identity: 28.7
  • Coverage: 209.0
  • Bit_score: 118
  • Evalue 3.30e-23
C50F7.5 {ECO:0000313|EMBL:CCD67453.2}; TaxID=6239 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhab similarity UNIPROT
DB: UniProtKB
  • Identity: 32.9
  • Coverage: 167.0
  • Bit_score: 125
  • Evalue 3.80e-25
rne; ribonuclease E similarity KEGG
DB: KEGG
  • Identity: 21.2
  • Coverage: 651.0
  • Bit_score: 84
  • Evalue 2.00e-13

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Taxonomy

Caenorhabditis elegans → Caenorhabditis → Rhabditida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 3126
GTGGAAGGAAATATTTCGCCAACCGAGGGTTCTGAACCCTCCGAGCCTTCCCGTGAAAATAATATTTCGCCATCGGAAGAGACTCAACCGGAACAGCCAAGTCGAAAATCGGCAATCAGCCCAACCGAGGGATCTGAACCCTCCGAACCCTCACGTGAGGACAATATTTCGCCAACTGAAGAATCGGAGCCATCAAGTCCGGAGTCAGATGGAGCTATAGATCCAACTGAAGAATCTGAACCTTCTGCTCCAAACCGAGATGAAAACATTTCTCCAACTGAGGAGAGCGAGCCGGAAGAGTCGAGCAAAGAAGGAAATATTGATCCACCTGAAGACTCTGAGCCAGCAAGCCCGGATTCGGATGGCGCAATAGACCCAACCGAAGAAAGCGAACCGGATCAACCACAGAGGGAAAACAACATCTCTCCGACAGAAGAAAGCGAGCCTTCAGAGCCAGATCGAGATGGGGCGATAGATCCGACCGAAGGCTCTGAACCCTCTGAACCAGATCAAGACGGATTCATCTCCCCAACCGAAGAATCTGAGCTAGAAGAGCCACAGAAAGAGGGAAACATTGATCCGTCTGACAAAGAAACAACCGATGGCACCGGAAGCGAGCCGCTTTCTAAACCAAAAAAGGAAGGAAACATCGACCCGACAGACGCTGAAAATACAGATGGTATAGGTGGAGAAAAACTTTCCGAGCCACAAAGACAAGGCAATATTGATCCTTCGAACAAAGAAACGACGGATGGAACAGGGACCGAATCTCTTGAAGAACCGCAAAAAGAGGGAAATATCGATCCAACAAACGCCGAGAAAACAGATGGCGTAGGCGGCGAAGAACTTCCCGAGCCTCAACGTGAAGGCAACATCGATCCGACTGACTCGGAGAACACAGACGGCATCGGCGGAGAAGAAATCGAAAGAGAGCAGCCGTTGAAGTTCCAGCCAGCTCGGTTCAGCAGTCAAATTGATCCGGAAGACGTCGACTTCGTTGACTCGGTTGCCGGAAGCGAAGACGGCGCCCCAGAATGGGAACCGCCGCTCCGATACCAGCTAGAAATTTATGCTGATCAAATCGATCCGGCAGATGAAGGCGGCAAATATCAGCTTGAACGGTTTGTTGCTGGCAGCGATGAACCGGGTGGCGACATACGCGATATGGAGTATGGCAACGAAGGCGCCACGGGGAAGCTTCGATTTCAAAATGTCGTTGAAAAGGCGTTGGATAGTGGCACGATTGATCCCAGCTTTGAAGACGGGGTTTATTCGCTTCCCAATTTTGTCGCTGGTTCTGATGAGCCTGGAGGAAACGTTCGGGATATGGCTTACGATCAGGGCGGAGCAAATGAAGAACTTCACCACCAGCCCCCAAACATTCAGCAAAAGCTTCAGGGCGGCACAATTATCAACCCGGAAGATGAAGGCGGGCGATATCAGCTTGATCAATTCGTTGCTGGTTCTGATGAGCCGGGTGATGACATTCGAGACATGGAGTATGGGGTAGAGGGCGCAAGTGAGACTCCACGGCATCAGCCTGAAAACATTCGCAAAAAGCTCCGGTCAAATGCGATTATTAATCCTGAAGATGAAGGCGGGGGGTACCAACTTGAAGAGTTTGTCGCAGGCGCCAATGAACCGGGGGAAAACATTTTAGAAATGCCCGATTCTGAGCCGTATGAGTGGTCAATGGCGTTTCAGTCAGACCGGTTCAAAGGTCAGATCGACCCGGAAAGTGGAAGTGAGTTTCGTGAAGACTTTGGAGATACGTTTCCCGGCGAAGATAATTCTGCTCCTGAATGGGAAGTTCCCTTGAGGCATCACACTGAACGCTTCGCTGATCAAATTGATCCGGCAGATGAAGGCGGCAAGTATCAACTTGAGGGGTTTGTCGCCGGATCTGACGAGCCTGGGGGCGACATACGCGATATGACGTATGGCAATGAAGGCGCTTCTGAAGAACTTCGATTTCAAAAGGCAGTTAATCAAGCGCTGGATAACGGGACGATTGATCCAAGCTTTGAAGGAGGCCAATATCTTTTGCCAGAATTTGTTGCTGGAAACAATGAGCCCGGCGATAATGTTCGAGATATGGCTTACGACCAGGATGGGGCAAGTGAAGGACTTCGCCATCAACCTGAAAATATTCAGCAAAAGCTTCGAGCAAGTACGATCATTAATCCTGCTGATGAAGGCGGCCGCTACCAGCTCGAACAGTTTGTCGCTGGAAGCGATGAGCCGGGCAGCGACATCCGGGATATGGGATATGACTTTAGTCAAACCAACGCCCCACTCCGACATCAGCCTCAAAATATCCAACAAAAACTTCGTGATGGGGGGGTTATTGACTCTTCAGATGAAGGAGGCCGATATCAGCTTGAGCAGTTTGTAGCCGGTTCTAATGAACCCGGCGATCAGTTTTCACAGTTTGGATCTGCTGGTAGAGACCCGCAAGGAGAGTCGGCGTTTGGAGCAGAAAGTTCTCATGGGAGCAATGGACCGGTCTTGAACCCGGCGTTTAACAACCTTGAACCAAAACAGGTTGAGCTCGTTCTTCAAAATGAAAGAGTCTCAGTGATTACAGAAGGGGCGTTTCCCCAGTCTGAAAATGGAATTGAAGAGCGAAACGAGCCGCTTGAACACCAATCTAAACAGCTTGAAGGTCAAATAAACCCGAGAAATCCAGACACGACGGATGGGGTTGGCGGAAATTTTAAAAACTCTGAAAACGCTACGATCGAAGCAAATGAAACAGAAGAATTTCAAACCCGGTTTCAAGGAGAGATTGAAGACTTGAACCGCACAATTCGATTAAGACAGTTTGATAATCTTTTTGGCGACGGGCGAACAGACTTGCCAGTTGGAGATACTCCCATTCCACGAGCAGAGTTTACACTAGCGAGTATCGGGCCGGATCAGCCGCTTATTCTCCGACGCCCAGAATCAGGTGGCGGATCTTCTCTAATTGCAAACGCAAAGCAAGCAGACAGCCGAATCGCTCCAGCCGGATCGGCGGCAGAAGATGCAGTGAGAATGTCGAAGTTCTTTGCGACGGGGAAAGGAATTACGTACAACATAAAACAGCAGTTTCTCCAAATCCAAAACCCACGAACGAGAACTCGA
PROTEIN sequence
Length: 1042
VEGNISPTEGSEPSEPSRENNISPSEETQPEQPSRKSAISPTEGSEPSEPSREDNISPTEESEPSSPESDGAIDPTEESEPSAPNRDENISPTEESEPEESSKEGNIDPPEDSEPASPDSDGAIDPTEESEPDQPQRENNISPTEESEPSEPDRDGAIDPTEGSEPSEPDQDGFISPTEESELEEPQKEGNIDPSDKETTDGTGSEPLSKPKKEGNIDPTDAENTDGIGGEKLSEPQRQGNIDPSNKETTDGTGTESLEEPQKEGNIDPTNAEKTDGVGGEELPEPQREGNIDPTDSENTDGIGGEEIEREQPLKFQPARFSSQIDPEDVDFVDSVAGSEDGAPEWEPPLRYQLEIYADQIDPADEGGKYQLERFVAGSDEPGGDIRDMEYGNEGATGKLRFQNVVEKALDSGTIDPSFEDGVYSLPNFVAGSDEPGGNVRDMAYDQGGANEELHHQPPNIQQKLQGGTIINPEDEGGRYQLDQFVAGSDEPGDDIRDMEYGVEGASETPRHQPENIRKKLRSNAIINPEDEGGGYQLEEFVAGANEPGENILEMPDSEPYEWSMAFQSDRFKGQIDPESGSEFREDFGDTFPGEDNSAPEWEVPLRHHTERFADQIDPADEGGKYQLEGFVAGSDEPGGDIRDMTYGNEGASEELRFQKAVNQALDNGTIDPSFEGGQYLLPEFVAGNNEPGDNVRDMAYDQDGASEGLRHQPENIQQKLRASTIINPADEGGRYQLEQFVAGSDEPGSDIRDMGYDFSQTNAPLRHQPQNIQQKLRDGGVIDSSDEGGRYQLEQFVAGSNEPGDQFSQFGSAGRDPQGESAFGAESSHGSNGPVLNPAFNNLEPKQVELVLQNERVSVITEGAFPQSENGIEERNEPLEHQSKQLEGQINPRNPDTTDGVGGNFKNSENATIEANETEEFQTRFQGEIEDLNRTIRLRQFDNLFGDGRTDLPVGDTPIPRAEFTLASIGPDQPLILRRPESGGGSSLIANAKQADSRIAPAGSAAEDAVRMSKFFATGKGITYNIKQQFLQIQNPRTRTR