ggKbase home page
Advanced Search
Search Help

sw_6_scaffold_1007_1

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: 3..3824

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like n=1 Tax=Pundamilia nyererei RepID=UPI0003AFE961 similarity UNIREF
DB: UNIREF100
  • Identity: 20.0
  • Coverage: 724.0
  • Bit_score: 69
  • Evalue 2.20e-08
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 129.0
  • Bit_score: 67
  • Evalue 2.60e-08
Glutamic acid-rich protein cNBL1700 {ECO:0000313|EMBL:AAM19760.1}; TaxID=6334 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichinellidae; Trichinella.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 19.5
  • Coverage: 512.0
  • Bit_score: 67
  • Evalue 1.50e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Trichinella spiralis → Trichinella → Trichocephalida → Dorylaimia → Nematoda → Metazoa

Sequences

DNA sequence
Length: 3822
CCTCTGTCAAAAGACAACCGGGCGTCTCAAGCAGTTTGGAGTCAGCTTGATGAAGGGCAGCCTATAGATGATATTGGCAACGAGTCATTTTTTGATGCGAGTTTTGGCGAGTTTGGAAAGGGAACCCTTGGCTTTATGAATTACACTCTTTCCATGCCTCAAAACCAGATTATGGCTTTGGGCAATAAACTCTATGACTTAACCCAGAATGGTCCTACCAATTCAGAGAATGTTTTCAAGCAGGCTCTGTTGGGCTATGACTACACTCTGATGGGTCCACCTTCAGAAGACAAGACTCACTATACTCCCATTGCAAAAGACCCGGAAGACCGAACTGTTTGGCAGTATTTAGGTGCATTTGGTGGTGATGTTGTTTTTGGTGGATTAATCGATGCTGGGTTAGGTACTCTATTCAAAACGGGGGCAAGGACTGCTAGGCAAGCACAAAACCTAGCCCACTCATTTAACTACAATACCCCCAACTTCATGGATGACATTACCCAGCAATTACCTGGCTCTAGTGCTCCTTCTGTTTTACCTAAGAGTGGTCAGACTAGCGGGACAGTCTCTATACCTACTCAGAACAAAGGCTCTTACACCCAGCCCAACCAACCTGCAAATAATTTCTCTGTTTTCGATTACTCTAAGTTCCAAGTTAGTAAAGAAACTAACCAGGCTCCCCCGACAACCATTGATATATCTAATAACACTGGTGGCGGCAACGCTACTATAACCAAGGCTCCGGAATCATCCGAAGCAGATTACGTTCTGACTGTTAAGCCCAAAGGAAAACCAAAGCAGAAAACAACACCATCAGGCAAAGAAGCTAAGGCTAAAGATGTTACTGCTGAAGAACCCTACCAAGAAGGGGAAACTAATATAAGTACGTACGCTAATCCTAAAGGAGAGGGGTTAACACCTAAAGGAGCAAAACAGCAGGAAGGAGGCGCTTACCAAAAACCTGGTGACACAGTAGATAAAGAAAAGAGAGATAGGCTTAAAAAGGCTAGGAAAAAGTCAGTAGACGAAAGGAAAAGGCAAGCTGATATAGACTTTGAGACCATGCTCAATGAACTAGAGCATAGTCAGCTAGCCAAAACCCAAAAGGTTCAGGACATAGTTAACCCAAACAAGAATACCTACAACATGGATGAGAGCAACATCCCTAGCGTTTGGCAGTTAACTCGCCCTCAACGTGCTCTGGATAAGGTTGACACTGTGCGAATGAAGCCTGTCCCAGAAATAGAAAACCTAAATGGTAAGAGAAGCAAAGAGCAACTCACTAACCTAGCAAGACGTAATGGTCACATCAAGCAGAACCGTCAAACCCCGTTAACTGATGAGGAGTTAACCAACCTGCAGGGTAGTTACGGGCGTATATACTCCGAGTATGGTAAGCCTTTAGATGACAAACTACTCAATCCTGCTGAAGAGGCTCCTGAGGTGGCTACAAAGCTACCTAGCAGCACCACTGGAGAGCCAGGACTTTACCGGCGCTTGTTTATCCAGCAGCCTGACGCGGATGAAATAGACCCCACGCGCAAGTATCAGTTCCTAATCACTAATCAAGAGAAACAGTTTGAGGATACTGCTATGGGCGTTATTGAGTCCATAGACAACCCTAAGCTCTACCCCGAGCAGGCAGCAGTTGGTAAAGAAATAGAGGCTTTCACGGGCAACATTAAACAACTGCTCAACAACATTGAAAACACTAACTTTAAGCAAGAAGCTCTGCAGACAGCGGAGTTTGGGGCTAAAGAGTTACTAGTCAAAGCTGATGACCTCCAAGACACCCTCGCTAGAACTGACTTCCAGACTCCTCTTAAAGAAGGAGCCACCATCAGCAAAGATGTAACCCTTAAGAGTTTCAGGAGAGTCAGAGACAAGCTTCTCAAGCTAAACGACAACCTGGAACAAACTAGACCTATTAAAAAAAGAGCGGCTAGGGCTAGCTCTAAAGCTGGAAAGGCTGCTGCTGAGAATGCTCCTAAAGCTGGCAGAATAACTGCCGGTGGGATGCGCAATATTACGGCAGAGGTCAGGCAGGTAACAGATGACCTGGAAAACACTGACTTCCTTACTACGGTTAAACGCGCATCGAAGCGGGGAATAAAGGACACAGTCAAGGGAGTGAAAAAGCTCTCCAAGCAAGTAAGAAAGCTCACTGATTTAAGAGCTAGAGCTGACGCTGAGACACTAGCCCAGGACGAACTAGAAAACCTTGCCCCTAGGTCACACCAAAAAGCAGTCCCCGACACTGTAGCCAACCGAATCGAAGCAGAGAGGCGCGTTAACCAAAAGAGCCAAGACGCCAGGTTACATCAAGGGGAAGCAGAAGCAGCAACTAGGGTTAAGGCTGGGAGGCAAGAACACCAGAAGAGACTGCCAGAAGGACTAGAGAGGCAAGACATAAATGAGGAAGCCGCTTCTCAGTCTTACAACAAAGTGGCTGTTAATGCTGTTGATGCATCTGACCCTGAAACTATTAAAGCCCGAGCAGAAACATTGACAGATGAGTCCCAAAGGCTTAGCGGTAAAACTTTCTACCACGGAACTAAGGTAGATTTGCAATCTTTACAGAGGGGACCAGAGGATAATCTGTTTTCTGCTGTTGACCCGGAAAAAGGTGGCTCCAGCTCCAACATGGGGGTAGGAATACACATGACCGATACCCCGGAAGTAGCAGAGCAGTATGCTAAGGCACAGAAAACTCCCCACCAACCTGACATTCCCGAGAAGGAATACATTCCTGAGGGACAGGTAATCGAAACTGGTATAACTACCAGAGCACCGCTGAAAGCAGACGTCAAAACCAAAGATTTGCCAGATGAGGGGAAAGACGTCCGAGAGGTATTCAAGGAAACAGGTAAGGCTCACATGCCTAATAAACAACTCGGTAGTTCTTACTCTAAGAAAGTGAGAAAAGACCGCACTGTTGAGGGCTATTACGAGAGCTTCCGTAAAACCCTGGCAGACAACAACGAAATGAGCGAGCAAAGGGTTAGAGCTTTCCAGAGAGACGTGACTAGTAACCTGAAGAAGAAAGGCTATGACGCACTCTATAAGACTCAGAAAGATGGCAGCGAGGCAATCAATAGCCTCCTCCCGGAGAACGTTCAAACCACTGCTGTTAATCGCAGTGCTGGCTCTGGTGACGCTCTTGTTAACAAACAGGCACGTAAATACGTGGATGACTTATCAGACAACGACACAGAGGTTGCAGAAGCCAACCGCACCCAATCTGACATCAGCTTGGCACGCGGATTAGAGAAAGAGCACAGCGAGACTCATGACGAACTAGCAGAGGAGGCAGTAGAGGCGCAGGATGAAGCCAATGAAATGGACATACAGGCTCGAGAAGAGACCCAAGAAGCTAGGGAAGCAGAGCTGGAATCAGCAGAACAAGGCTTAGAGGAAGACTTTGAAGAATTAGTAAAACAAGAACAGAACCCCTCCTCAGAAGAAATCTTAGAGCAGCAAATAAACAAGGAAATTGCTGACCTGGAAGAGTCTTTAGGAACACCGGAAGCAAACAGCAAGCTCATGAATGAAACAGAACTTGAGGAAGCAGAAGAAATAGAAGAGCTATACAACGATTTGTATAAGCTGGCAGTAGAGACAGATAACGTATTCGATGAGACTCAGTTTAAGCAAATAGGGGCTATCAAGAACTACGATGGACAGGTCAAAGATGAGATTATAGAAACGCTTATGAACAATGGCGTCCTTGAAGAAGATGGTATCACGCTCAGCCTCAGTGCTAATAGCATGGGCGAAATAAACTGGAAGATGATTAAAGGAAATCTAACTGATTGTATCTAA
PROTEIN sequence
Length: 1274
PLSKDNRASQAVWSQLDEGQPIDDIGNESFFDASFGEFGKGTLGFMNYTLSMPQNQIMALGNKLYDLTQNGPTNSENVFKQALLGYDYTLMGPPSEDKTHYTPIAKDPEDRTVWQYLGAFGGDVVFGGLIDAGLGTLFKTGARTARQAQNLAHSFNYNTPNFMDDITQQLPGSSAPSVLPKSGQTSGTVSIPTQNKGSYTQPNQPANNFSVFDYSKFQVSKETNQAPPTTIDISNNTGGGNATITKAPESSEADYVLTVKPKGKPKQKTTPSGKEAKAKDVTAEEPYQEGETNISTYANPKGEGLTPKGAKQQEGGAYQKPGDTVDKEKRDRLKKARKKSVDERKRQADIDFETMLNELEHSQLAKTQKVQDIVNPNKNTYNMDESNIPSVWQLTRPQRALDKVDTVRMKPVPEIENLNGKRSKEQLTNLARRNGHIKQNRQTPLTDEELTNLQGSYGRIYSEYGKPLDDKLLNPAEEAPEVATKLPSSTTGEPGLYRRLFIQQPDADEIDPTRKYQFLITNQEKQFEDTAMGVIESIDNPKLYPEQAAVGKEIEAFTGNIKQLLNNIENTNFKQEALQTAEFGAKELLVKADDLQDTLARTDFQTPLKEGATISKDVTLKSFRRVRDKLLKLNDNLEQTRPIKKRAARASSKAGKAAAENAPKAGRITAGGMRNITAEVRQVTDDLENTDFLTTVKRASKRGIKDTVKGVKKLSKQVRKLTDLRARADAETLAQDELENLAPRSHQKAVPDTVANRIEAERRVNQKSQDARLHQGEAEAATRVKAGRQEHQKRLPEGLERQDINEEAASQSYNKVAVNAVDASDPETIKARAETLTDESQRLSGKTFYHGTKVDLQSLQRGPEDNLFSAVDPEKGGSSSNMGVGIHMTDTPEVAEQYAKAQKTPHQPDIPEKEYIPEGQVIETGITTRAPLKADVKTKDLPDEGKDVREVFKETGKAHMPNKQLGSSYSKKVRKDRTVEGYYESFRKTLADNNEMSEQRVRAFQRDVTSNLKKKGYDALYKTQKDGSEAINSLLPENVQTTAVNRSAGSGDALVNKQARKYVDDLSDNDTEVAEANRTQSDISLARGLEKEHSETHDELAEEAVEAQDEANEMDIQAREETQEAREAELESAEQGLEEDFEELVKQEQNPSSEEILEQQINKEIADLEESLGTPEANSKLMNETELEEAEEIEELYNDLYKLAVETDNVFDETQFKQIGAIKNYDGQVKDEIIETLMNNGVLEEDGITLSLSANSMGEINWKMIKGNLTDCI*