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sw_6_scaffold_2353_4

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(4986..6389)

Top 3 Functional Annotations

Value Algorithm Source
Putative TATA binding protein family protein n=1 Tax=Zea mays RepID=K7W152_MAIZE similarity UNIREF
DB: UNIREF100
  • Identity: 32.0
  • Coverage: 437.0
  • Bit_score: 198
  • Evalue 1.50e-47
transcription initiation factor TFIID subunit 6-like similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 444.0
  • Bit_score: 198
  • Evalue 4.70e-48
Transcription initiation factor TFIID {ECO:0000313|EMBL:AIZ06018.1}; TaxID=1293079 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; similarity UNIPROT
DB: UniProtKB
  • Identity: 32.0
  • Coverage: 437.0
  • Bit_score: 198
  • Evalue 2.10e-47

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Taxonomy

Zea nicaraguensis → Zea → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1404
ATGGAGACGCTTGTAAGGGAGGCGGCAGAGAGCGTTGGGCAGACACTCTCAGCGAGCGAATCTTCAGAAGCCTCCGTGTGCTCATCTCTCGCGCCCGATGCACAAGCACGCTTGCGCGAAGTGTTGCAAGATGCACGCAAGCTCATGCGTCACGGCAAGCGATGCTCGCTCTCGCATGATGATCTCAATCGCGCGATCTTCCTCCGCCGCGCCGAGCCCCTCTACGGCCAGCCCGCCCATGCCGGCCACTGGGCTCGCCCCGCGCGCGATCTCAGCATCGCTGTGCCTTCCGATGGTGACGCCAATCTCTCTGCTGAAGCCTCTGGATCTTTCTTGCCCAATCCGCCCACCTCTGCCAACCTCATCGCCCACTGGCTCTGTGTTGACGGCACAATGCCCAACATCCCCGAGAACCCATCGCCTGATGAGCAAGACAAAGCCGCTGCTTACGCTACGTCTGCTGCAACTGCTGCTGCTGAAGATGATCATGATGGTGTTCCTTCTGCTGAGCCTAAACCAATGACTCGCCCAGCTCGTGGTGTACATGATTCGCAGCCTAAGGATGAGCAGGCTCGCGATAGCTCTGGGCGCAACGTTCTACGATTGCCCGTTGCGCACGCGCTGCCACAAGAGGTGCAGCTGTTTGGTGAGAAGCTTGCTGAAGCGACGATGTGCTGTGGCGCTGGATCGAGGGCTTTACATGCAAGTTTAGATGCTATACGACGCGAACGCGCTGTCACACAGCTCGCACCATACCTGGTGAGCTTCTTTGCGGAGGAGATGACGCATAGCGGCGAACGCGCTGCTAATGCAATAAGCGCATCCAGAGCCCTGCTTTGCAACCAACACGTCAACCTCGCACCGTATCTGCAGGAGCTCATCCCGCCAATACTCACCTGCGCAGTTGCAAAGAAATTGAGTGGGACAGCCGCGACGACGCACTTGGAAATCCGAGACTCATCCGCTGTCGCGCTCGCGCTTATCATTCAGCGCTATGCTAGCTCGCACCCGTCATTGCGACCACGAGCGTCACGCCCGCTTTGTCGAATATTAACAGATTCAGAGAAACCACCGCAGGCAGTGTACGGCGCGGTGCAGTGTCTACGTGCGCTCGGGCAGCGCACAGTACGGAGCGTGCTGCTACCGAACGCGCTCGATACGTACAGAAATCTGCAGCGTTGGCTGAGCGAGCCGAAAATGCAGGAGGAATCCTTGCGAGCGTTGGGCGTGTTGCACCAGGCAGTAGGCACGGAGTTACATACAAGGTTGCTGCAAGAACACCTGCCAGAATCAGCGCTTGAAGGCGACGACACGGGCCCAATCCTGGAGCAGTTCCTGGGAGAGGTGGGTGATGCAATGGAGGCGTTCGTGCCATCATCGCTTGCAGTGCTCACTTTTGTGTGA
PROTEIN sequence
Length: 468
METLVREAAESVGQTLSASESSEASVCSSLAPDAQARLREVLQDARKLMRHGKRCSLSHDDLNRAIFLRRAEPLYGQPAHAGHWARPARDLSIAVPSDGDANLSAEASGSFLPNPPTSANLIAHWLCVDGTMPNIPENPSPDEQDKAAAYATSAATAAAEDDHDGVPSAEPKPMTRPARGVHDSQPKDEQARDSSGRNVLRLPVAHALPQEVQLFGEKLAEATMCCGAGSRALHASLDAIRRERAVTQLAPYLVSFFAEEMTHSGERAANAISASRALLCNQHVNLAPYLQELIPPILTCAVAKKLSGTAATTHLEIRDSSAVALALIIQRYASSHPSLRPRASRPLCRILTDSEKPPQAVYGAVQCLRALGQRTVRSVLLPNALDTYRNLQRWLSEPKMQEESLRALGVLHQAVGTELHTRLLQEHLPESALEGDDTGPILEQFLGEVGDAMEAFVPSSLAVLTFV*