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sw_6_scaffold_3618_2

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(667..1206)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4D3D2_BRARP similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 165.0
  • Bit_score: 132
  • Evalue 5.00e-28
BnaC03g75680D protein {ECO:0000313|EMBL:CDY51992.1}; TaxID=3708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 165.0
  • Bit_score: 133
  • Evalue 4.10e-28
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 139.0
  • Bit_score: 108
  • Evalue 1.70e-21

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Taxonomy

Brassica napus → Brassica → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 540
ATGCGTCCCCAGCCCTGGCGCTTCGCCACTGCTGCCCTCGTTCACGGCAGCCTCATGCACCTCCTCGTCAATTCCGTCTCCCTCTCCGACATCGGCCACACCTTCGAGTCTCTTTGCGGCCGTGATCGCACTCTTGCCGTCTACGGCTGCTCCGCCGTCTGTGGCAACGCAATTAGTGTTTTCCTCAACAGCAACAACGCCCTCGGCGCCTCCGGCGCTATCATGGGCCTCGCTGGCGCGTTCGCAACCACGCTCGGCGTCAACAGGCGCTTCTTGAGTCCCCAGGCGATGGAGATGCGCAACACTATTTTACGCGTTGTTGCTATCAATCTCGCGATTGGTGGCGTCGCCCGAGGGATTGTTGACAACTGGGGCCACATCGGCGGCCTTCTCGGAGGGATTGCCTCCGCGTACTGCTTCGGCCCACGCCTGAAACGCCGAGGCCTTCAAATCGTTGATGAACCGCCAATTCCAACGTTTGCTAGCACTGGAAGCCTTGCACGACTTACATTGAGGCGTCTGCCGCCAGAGCTCCGCTAA
PROTEIN sequence
Length: 180
MRPQPWRFATAALVHGSLMHLLVNSVSLSDIGHTFESLCGRDRTLAVYGCSAVCGNAISVFLNSNNALGASGAIMGLAGAFATTLGVNRRFLSPQAMEMRNTILRVVAINLAIGGVARGIVDNWGHIGGLLGGIASAYCFGPRLKRRGLQIVDEPPIPTFASTGSLARLTLRRLPPELR*