ggKbase home page

sw_6_scaffold_441_23

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(15690..16469)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=halophilic archaeon J07HX64 RepID=U1P2Y9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 204.0
  • Bit_score: 350
  • Evalue 1.30e-93
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 204.0
  • Bit_score: 350
  • Evalue 1.80e-93
tfb4; transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 202.0
  • Bit_score: 349
  • Evalue 1.10e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

halophilic archaeon J07HX64 → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 780
ATGTCAGATACGAACGTGAGACGCTTCCAGCGTGCCCGAGACGAAGAAGAACAGGAGGAAGACGAGCAGAGCGAGACGCTCGTCTGTCCCGAATGTGGCGGCTCGGTCGCAACCGACACCGAGCACGGCGAGACGGTGTGTGAAGACTGCGGGCTCGTCATCGAAGAGGGCGAGATCGACCGCGGGCCGGAGTGGCGCGCGTTCGACGCCGCGGAGAAAGACGAGAAGTCCCGCGTCGGCGCGCCGACCACGAACATGATGCACGACAAGGGCCTGTCGACCAACATCGGCTGGCAGGACAAGGACGCCTACGGCAACCAGCTGTCCAACCGGCAGCGTCAGAAGATGCAACGGCTCCGCACCTGGAACGAGCGGTTCCGCACCCGCGACTCCAAGGAGCGCAACCTCAAACAGGCGCTCGGCGAAATCGACCGGATGGCGAGTGCCCTTGGGCTCCCCGACAACGTCCGTGAGACGTCGAGCGTCATCTACCGGCGGGCACTCGACGAGAACCTCCTGCCCGGCCGCTCCATCGAGGGCGTTGCGACCGCGAGTCTGTACGCCGCCGCCCGACAGGCCGGCACCCCGCGCTCGCTCTCGAAGTCGCGCCCGCCGACCCCGAGAGCTACGTCCCGCGGTTCGCCTCCGATCTGGACCTCTCCGACGAGGCCGAACGCCGCGCGCGGCAACTGCTCAAGAGCGCGAAGGAGCAGGGCATCCACTCCGGCAAGTCGCCGGTCGGCCTCGCGGCCGCCGCGGTGTACGCCGCCTCGCTCCTGA
PROTEIN sequence
Length: 260
MSDTNVRRFQRARDEEEQEEDEQSETLVCPECGGSVATDTEHGETVCEDCGLVIEEGEIDRGPEWRAFDAAEKDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNQLSNRQRQKMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPDNVRETSSVIYRRALDENLLPGRSIEGVATASLYAAARQAGTPRSLSKSRPPTPRATSRGSPPIWTSPTRPNAARGNCSRARRSRASTPASRRSASRPPRCTPPRS*