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sw_6_scaffold_629_1

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: 811..3351

Top 3 Functional Annotations

Value Algorithm Source
Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic; EC=2.7.7.8;; Polynucleotide phosphorylase 1; Short=PNPase 1;; Flags: Precursor;; TaxID=39947 species="Eukaryota; Viridiplantae; Str similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 863.0
  • Bit_score: 418
  • Evalue 3.00e-113
Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic n=1 Tax=Oryza sativa subsp. japonica RepID=PNP1_ORYSJ similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 863.0
  • Bit_score: 418
  • Evalue 2.20e-113
polynucleotide phosphorylase/polyadenylase similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 748.0
  • Bit_score: 388
  • Evalue 6.80e-105

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Taxonomy

Oryza sativa → Oryza → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 2541
ATGGCGCTGGCGCGGAGCACAAGTGGCTCAAAATGCAGGAGACTGGCGAAGCAGGAAGCGCTCGCTCAACCTCCTCGGCGATCTGGCGCGGGAAACTTTCGTGCACGCGTGGAGCCAGAGGAAGCTGAAAACGATGAAGTGGCGCTGCACGTGGAATCACCGGAGGATTTTTCTGCACCAACTGCTGAGGGGCCGCTCAGCCCCGCCTCCGCTACTCTCGAGGTGGGCACTGCATCAGTCACGCTCGAGGTAGGCGAGATCGGGCAGCAGGCCGATGCCGCCGTCTGGGCCTCTGAGAATGACGCTCGCGTGCTCAGTTCCTGCTGTGTCGGCCCGCGTATCGACCGCTCTGGCCAGGGCTCTATGACGCCTCTCCAAGTTGTATACTCCGAGCGCTTCAGCGGCGCTGGCTCCACTCCCGGTGGCTTTGTGAAGCGCGACGGTCGCATTAAGGAATTCGAAGTACTTGTTGCTCGGCTCATTGATCGCTCGCTTCGTCCCATCGTCGCAGAGGCGTTTCCGCGTGAAGTGCAGCTATCCACAACCGTCTTCTCAATTGATCCCGACCGCCTCCCTGACCAGCTCGCGCTGCTCGCATCCAGCGCCGCCCTGTCACTCAGCCGTGTTCCGCTTGAGCTGCCTGCCGTTGCTGGCGTCCGAGTCATTGTCGACTCCCCAGGCTCCCAACCTCAGATCAACCCCTCCAACGTGGCGCTCAATGACAGCGACATGCCGCTGCCTGCTTCAGAGGCCATCGGCGACGATAAACCAACGAGAGAGCATGGCTCGCTCTCTGTCGACAAAGGAGAAAAAGGAAAATTCCAGCATCCTGTTGTTGACATGATTGTCTCGGGCACGAAAGAAGGCATTCTCATGGTTGAGGGTGGGGCTGACCTCTCTCCGAAAGAAGATGTTCTCCGTGCAATTAACAGTGCTCATGTCGAGATTGCTCGGGTGTGCGATGAGCTCGAAACGTTGGCTGCTAAGGCAGGACGCGAAAAAGAGAGCGTATTCGAGAGATGGAATGCGAGCGCAAGCATTAAGGAGGCAGAAAATTTTGTGCTCAACAATGTCGGCAATCTCTTGAGCGAGTGGTCCTACGGTGGCGGAAGTACGCCTTTCAGCAAGCAGAAGCGAGGGGTAATTAAGGATCGGATCAAGGAGAGGGCGCTTGCGTTGGCCAATGAAAATGATGATGGCACTGACAGCAAGCTGCCCAACGCGCTCATTGGCGACGCCTTCGAGAGGCAATGCAAAAAATTCGTGCGCGCATCGTTATCTGAAGGCTTGACACGGCAGGACGGCCGGGCTGCCGACGAGCTTCGGCCGATATCTGCATCAAGCGGCAGGATGCTCCCCAATGCACACGGGTCGGCAATCTTTCGTCGTGGCGAAACGCAAGCTATTGGTGCGGTGCAGCTTGGCTCAGATTACGAGCGGCAACAAGTTGACTCGCCCACGCGCCCTGGCCCCAAACGCTTCTCACTGGATTACTACTTTCCCCCCATGAGCGTTGGTGAGACCGGACGCCTTGCAGGGATGCCGTCTCGCCGCGAGGTTGGTCATGGTGCTCTTGCTGAGCGGGGACTAAAACCGATTGTTCCGCCCAAGTCTGATTTTGCACACAATATTCGTGTCGAAAGCACCATCTCTGGAAGCAATGGAAGCTCCTCTATGGCCAGTGTTTGTGTGGGTACGCTTGCGATGCTTGACGCCGGAATACCGATAAAGCAACCAGTTGGTGGTGTTGCAATCGGTCTAGTTAAGAATGGAAGCGACCCGGTGAACAGCACTATGCTTGTGGATATCCTTGGGAGTGAAGATTTCATGGGCGACATGGACCTTAAAGTCGCTGGTGGCGGCGATGGTACTGTCTCTGCGGTGCAATTGGATGTGAAGAATCCGGCCGGTCTAAACAGCGAGCTTTTTGTGCGTGCGCTTGATGAGGCGGACTCGGCGATTGCGCGAGTGATTGACACAATGATGTCTACCTGCTCTCCGCCTCCCCAAAATCACCTTGCACATGGAGTTGACAGGACACTTACCGTCCAGATATCGCCTGAGATGGTTGGGAAGGTGATTGGCCCTGGTGGGAAAACGGTGAACGAAATCACGCAGCGCACTGGAATCAGCTCACTCGTGTTCGATAGCGAAAGCGGGCAAGGCACTTTGCGGGGGAAAACTGAAGACTCGATTGAGGCTGCTCGAAGAATGGTACACGCAATTGTTGGTGATGTTCACCAAGGGGACGAATTCACCAATGCGAAGGTGATGGCTGTCCCTGAGTACGGCATCATAGTGGAACTTGCGCCTGAAACGAAAGCTCTCATTCATGTCTCAACACTTAACTTGCCCAAAGGCTCTCCCGCGAGCGAGAGTGGCATCGCACCGGGAGAAACGCTGCATGTGATCATTCAAGAAGTGAATTCGAAGGGCTACAAGGCTGCATTGGTTGGCGACGGTTCCAGCGCTAATGGAGCTGGCGCAAAGGATGAAGAAAGTGCCGCTGATGGTGAGGCGGCGGCTGCTGCTGTTGGGTGA
PROTEIN sequence
Length: 847
MALARSTSGSKCRRLAKQEALAQPPRRSGAGNFRARVEPEEAENDEVALHVESPEDFSAPTAEGPLSPASATLEVGTASVTLEVGEIGQQADAAVWASENDARVLSSCCVGPRIDRSGQGSMTPLQVVYSERFSGAGSTPGGFVKRDGRIKEFEVLVARLIDRSLRPIVAEAFPREVQLSTTVFSIDPDRLPDQLALLASSAALSLSRVPLELPAVAGVRVIVDSPGSQPQINPSNVALNDSDMPLPASEAIGDDKPTREHGSLSVDKGEKGKFQHPVVDMIVSGTKEGILMVEGGADLSPKEDVLRAINSAHVEIARVCDELETLAAKAGREKESVFERWNASASIKEAENFVLNNVGNLLSEWSYGGGSTPFSKQKRGVIKDRIKERALALANENDDGTDSKLPNALIGDAFERQCKKFVRASLSEGLTRQDGRAADELRPISASSGRMLPNAHGSAIFRRGETQAIGAVQLGSDYERQQVDSPTRPGPKRFSLDYYFPPMSVGETGRLAGMPSRREVGHGALAERGLKPIVPPKSDFAHNIRVESTISGSNGSSSMASVCVGTLAMLDAGIPIKQPVGGVAIGLVKNGSDPVNSTMLVDILGSEDFMGDMDLKVAGGGDGTVSAVQLDVKNPAGLNSELFVRALDEADSAIARVIDTMMSTCSPPPQNHLAHGVDRTLTVQISPEMVGKVIGPGGKTVNEITQRTGISSLVFDSESGQGTLRGKTEDSIEAARRMVHAIVGDVHQGDEFTNAKVMAVPEYGIIVELAPETKALIHVSTLNLPKGSPASESGIAPGETLHVIIQEVNSKGYKAALVGDGSSANGAGAKDEESAADGEAAAAAVG*