ggKbase home page

sw_6_scaffold_605_26

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(16527..17198)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Thellungiella salsuginea RepID=V4MFK6_THESL similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 219.0
  • Bit_score: 279
  • Evalue 3.20e-72
40S ribosomal protein S6 {ECO:0000256|PIRNR:PIRNR002129}; TaxID=72664 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunnerid similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 221.0
  • Bit_score: 279
  • Evalue 4.40e-72
Os03g0390000; Similar to Ribosomal protein s6 RPS6-2. similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 219.0
  • Bit_score: 275
  • Evalue 1.90e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Eutrema salsugineum → Eutrema → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 672
GTGTTCGACGAGCAGAAGCTGCAGGCGTTCTATGAGAAGCGCTTGGGCGAGGAGGTTGAGGGTGACGCTCTCGGCGAGGAGTTCAAGGGCTATGTGCTGAAGATCACTGGTGGGCAGGACAAGGAGGGCTTCCCGATGAAGCTCGGCGTGCTCAAGCAGGAGCGCGTGCGCCTCCTTCTCCGTCCCGGCGAACAGTGCATGCGCGGCCACGCCCTCCGCTACGGCGCCAGCCGCCGCAAGTCCGTCCGCGGGTGCATCATCTCCCACGCCAACTCCGTCATCAATTGCATTATCACCAAAGTCGGCGAGAAGGACATCGAGGGCCTTACTGACACCGAGAAGCCCCGCTTGCGCGGGCCAAAGCGCGCCAGCAAGATCCGCCGCCTCTTCAACCTCAGCAAGAGCGACGATGTCCGCCAGTATGCCTTCACCTATGCCCGCCAATACCAGAATAAACATGGCAAGACCAAGACCAAAGTGCCCAACATCCAGCGCCTCGTTACCCCGCACCGGCTGCAGCGCAAGCGCCGCCTCCGTGCTAAGAAGCGCGAGCAGGTTCGCCAAAGCAAGAAGGAGGCTGAAAACTACGAAAAGCTCCTTCAGCAGCGCTTGCGCGAGCAGCGTGAGCGCCGCGACAAGCATCTGCAGAAGAAGCACAAGAAGGAGGCGTGA
PROTEIN sequence
Length: 224
VFDEQKLQAFYEKRLGEEVEGDALGEEFKGYVLKITGGQDKEGFPMKLGVLKQERVRLLLRPGEQCMRGHALRYGASRRKSVRGCIISHANSVINCIITKVGEKDIEGLTDTEKPRLRGPKRASKIRRLFNLSKSDDVRQYAFTYARQYQNKHGKTKTKVPNIQRLVTPHRLQRKRRLRAKKREQVRQSKKEAENYEKLLQQRLREQRERRDKHLQKKHKKEA*