ggKbase home page

sw_6_scaffold_783_6

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(6428..8305)

Top 3 Functional Annotations

Value Algorithm Source
Terminal ear1 (ISS) n=1 Tax=Ostreococcus tauri RepID=Q019K3_OSTTA similarity UNIREF
DB: UNIREF100
  • Identity: 31.3
  • Coverage: 323.0
  • Bit_score: 131
  • Evalue 2.30e-27
BnaC03g23930D protein {ECO:0000313|EMBL:CDY42813.1}; TaxID=3708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 25.2
  • Coverage: 606.0
  • Bit_score: 171
  • Evalue 3.70e-39
terminal ear1 (ISS) similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 323.0
  • Bit_score: 131
  • Evalue 7.20e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brassica napus → Brassica → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1878
ATGGTGTATCTCTGTGCGGAAGCGGGGGAGCAACAGGCAAGCGAGAACGCCCTCAACCCCGCGGCGAAGTCCTTTGGTCCGATGGCCATGGGAGGGGCGAGCTCGCGTCGCGCAACGCGTGTGGTGGTGGCGAGCGGCGCTCCAACGGAGGAAGTAAAAGCTATTGCGCGAGCCTGCGGAGATGTCAGTGCGTTACACGAGCTCTCGCCGTCATCGTCCCTTGCCACCTTCTTCTCAGCCAAACACGCGCTCTCTGCGCTGACTCAGCTGTCCGACCGCTTCGGCCCGTCCTCCGTCCGATTCGGCTCACCCTCTGAATGCCCAAGTGCTGGCGAGAATCAGGGCTCCATCGTTCTCTTCGGTCTCTCGCCTTCCGTTTCAAACGATGCTATCTCCTCCGTCTTCAACCAGTTTGGTCCCGTCCGCGAAGTCCGCGAAACACCCTCTAAGCGATCGCATCGCTTCGTTGAGTTCTGGGACTCCCGTGACGCTGACAACGCCCTCCGCTCGATGCACAAGCAGCCTCTTTTTGGTCGCACAATTAACATCGAATTTGCAAAGCCAGGTGGCGGTGGCGCTCGTGAGCGTGAGTTTCGCGAGGGCACACAGCAGCACCCATCGCCCCCCTCTTCGCCTAGTCACCAATCGCAACAGCAGCAGTACGCCGAGCTGAAAACTATACAGCAGCACCAACAGCAGCATCAGATGCCTGATCAGCAGCCACAGCAGTACCAGCCGCAGCCAATTCCAGTCTCCACTCCGCCAGCTGCAGCTGCAGCAGGCGCCGGATTTGGATATGGCCCAATGGATATGCAAGCCATGCAAATGCATCCGGCAACAATGCAGCTCTCTCCGCCCGAGGGTTTTGCACCGGTTGCCATCCCGATGGCTCCTCCGGTTTTCGCGCCAATGCACTCTTGCGCCGCTCCTGGCGGTGGCTTCGGAACGAATCCAAACACAGCAAACGGCCTCGCAGCGCAACAGCTCTACCACCCGTCACAGCAGCAACAACAGCAACAACAGCAGCAGCAGCAGTATTACCATGTGCAAAGCGGCGCAACGCACAATCCGCAGTGTAATCATTTCATAGATGGCCAACAATACCAGCCGATGATGCCGAACCACCGGGAGCAGCAGCAGAGCAGCGCGCTTCCAGGCACGCCCGAGGTCGATGAACACGGCATCACGCTTGACGATGGTCGCAAACTACCGGTGCAGTTGTGGAGAATGGATGCAAGCGGAAACGCGCCGGGGACGCTGGCACCGGTGTCAATTACACAGTGGTACTCGCATGGGTATTACGCTTTCAGCAGGGAAGAGGCAGCACGAGCAGATGGACGAACGACTCTCATGATCCGAAATCTTCCAAACCAGATGGACAAAACCGCGCTCTTGGCTGAGCTGGACGAGCGCGCCTTTGTGGGCGAGTGGGATGTTTTGTACCTGCCAACAGACAGCAGGAACGGCTGCAACCTTGGGTACGCCTTCATCAACATGAAGCGACCTGAAGTGACGGAAAGGCTGTTCGACGCGTTCCACTCGCTTAAGTGGGCAAACTACAAGACGAGAAAAGTGTGCGAAGTGACTTACGCGCGGCTGCAAGGGAGGAACCAGCTGATCAGCCACGTTGCCAATAGTAATAAGCCGGTCGACTCGCTGCCATTGCTAGCGGACGACGATGGCATGCGTGAAGAAGCAGACTTGCTATTGTACAGGAAGTCCGCATCCAATGGGAGCAGCAGTGTGAGCAGCAGCAACAGCAGTAACAGCAGTAGGAGTGGTGCAGCTATAGCGGACAGTGGTAACAGCTGCGACCAACAGCAGCACAACGATGAAGTGGAGAAGGCAGCACGGCCGGAAGGGAGGCGAAGAAGTTAA
PROTEIN sequence
Length: 626
MVYLCAEAGEQQASENALNPAAKSFGPMAMGGASSRRATRVVVASGAPTEEVKAIARACGDVSALHELSPSSSLATFFSAKHALSALTQLSDRFGPSSVRFGSPSECPSAGENQGSIVLFGLSPSVSNDAISSVFNQFGPVREVRETPSKRSHRFVEFWDSRDADNALRSMHKQPLFGRTINIEFAKPGGGGAREREFREGTQQHPSPPSSPSHQSQQQQYAELKTIQQHQQQHQMPDQQPQQYQPQPIPVSTPPAAAAAGAGFGYGPMDMQAMQMHPATMQLSPPEGFAPVAIPMAPPVFAPMHSCAAPGGGFGTNPNTANGLAAQQLYHPSQQQQQQQQQQQQYYHVQSGATHNPQCNHFIDGQQYQPMMPNHREQQQSSALPGTPEVDEHGITLDDGRKLPVQLWRMDASGNAPGTLAPVSITQWYSHGYYAFSREEAARADGRTTLMIRNLPNQMDKTALLAELDERAFVGEWDVLYLPTDSRNGCNLGYAFINMKRPEVTERLFDAFHSLKWANYKTRKVCEVTYARLQGRNQLISHVANSNKPVDSLPLLADDDGMREEADLLLYRKSASNGSSSVSSSNSSNSSRSGAAIADSGNSCDQQQHNDEVEKAARPEGRRRS*