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SW_6_UNK

In projects: SW_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.55 Longest contig: 253.36 Kbp Bin length: 44.06 Mbp GC content: 60.59 %
Contigs count: 15674 Features count: 56776 rRNAs count: 17 tRNAs count: 494

Genome completeness

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Displaying items 1001-1050 of 15674 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_6_scaffold_11599
Species: Pelodictyon phaeoclathratiforme (50%)
2 1986 bp 64.70 5.69 93.81
sw_6_scaffold_17912
Species: Halosimplex carlsbadense (50%)
2 1002 bp 45.51 5.69 68.56
sw_6_scaffold_13781
Species: Gloeocapsa sp. PCC 7428 (50%)
2 1213 bp 51.03 5.69 80.63
sw_6_scaffold_10578 3 1459 bp 44.21 5.69 76.70
sw_6_scaffold_17500
Species: Haladaptatus paucihalophilus (50%)
2 1019 bp 55.35 5.69 63.89
sw_6_scaffold_11579
Species: RBG_16_Planctomycetes_55_9_curated (100%)
2 1368 bp 32.60 5.70 102.41
sw_6_scaffold_14115
Class: Halobacteria (66.67%)
3 1193 bp 51.63 5.70 72.93
sw_6_scaffold_13519
Order: Halobacteriales (100%)
3 1229 bp 59.89 5.70 96.18
sw_6_scaffold_16830 5 2826 bp 42.92 5.70 75.37
sw_6_scaffold_8892
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (50%)
2 1649 bp 42.57 5.70 40.21
sw_6_scaffold_6589 3 2036 bp 52.31 5.70 78.24
sw_6_scaffold_9840
Species: Halosimplex carlsbadense (100%)
1 1540 bp 54.87 5.71 78.12
sw_6_scaffold_15079
Class: Halobacteria (66.67%)
3 1138 bp 58.35 5.71 94.11
sw_6_scaffold_17167
Species: Coleofasciculus chthonoplastes (50%)
2 1033 bp 50.82 5.71 89.74
sw_6_scaffold_8076
Species: Halosimplex carlsbadense (50%)
2 1768 bp 56.00 5.71 86.71
sw_6_scaffold_18650 3 1610 bp 52.61 5.71 64.47
sw_6_scaffold_13554
Species: Halorubrum californiense (50%)
2 1226 bp 60.36 5.71 77.81
sw_6_scaffold_7443 3 1873 bp 56.27 5.71 79.93
sw_6_scaffold_16098
Species: Halosimplex carlsbadense (50%)
2 1085 bp 53.36 5.71 98.99
sw_6_scaffold_16103
Species: Natronococcus jeotgali (50%)
2 1085 bp 63.41 5.71 93.73
sw_6_scaffold_37720
Species: Vitellibacter vladivostokensis (50%)
2 1103 bp 48.78 5.71 61.47
sw_6_scaffold_16805
Species: Halococcus salifodinae (100%)
1 1050 bp 55.71 5.71 87.14
sw_6_scaffold_10824
Species: Natrinema gari (50%)
2 1435 bp 48.43 5.71 94.49
sw_6_scaffold_15709 2 1103 bp 49.86 5.71 99.55
sw_6_scaffold_9848
Domain: Bacteria (50%)
4 1538 bp 40.05 5.72 100.07
sw_6_scaffold_7334
Species: Micromonospora lupini (50%)
2 1889 bp 53.73 5.72 61.62
sw_6_scaffold_14603
Class: Halobacteria (66.67%)
3 1784 bp 60.82 5.72 92.66
sw_6_scaffold_14210
Species: Natrialba taiwanensis (50%)
4 1188 bp 57.49 5.72 85.61
sw_6_scaffold_9992
Species: Natrialba asiatica (50%)
2 1521 bp 43.85 5.72 86.39
sw_6_scaffold_16814 3 1049 bp 57.39 5.72 95.52
sw_6_scaffold_10151
Species: Salinibacter ruber (50%)
2 1503 bp 42.12 5.72 68.66
sw_6_scaffold_13612 3 1223 bp 50.29 5.72 82.67
sw_6_scaffold_26376 3 1361 bp 46.00 5.73 81.78
sw_6_scaffold_16476
Species: Halarchaeum acidiphilum (100%)
1 1064 bp 43.70 5.73 99.81
sw_6_scaffold_9209
Class: Halobacteria (50%)
4 2722 bp 53.82 5.73 56.21
sw_6_scaffold_12351
Species: Haladaptatus paucihalophilus (50%)
2 1310 bp 58.17 5.73 94.35
sw_6_scaffold_6726
Species: Halopiger xanaduensis (50%)
2 2007 bp 57.75 5.73 79.52
sw_6_scaffold_17233
Species: R_RIF_OD1_12_48_27 (50%)
2 1030 bp 56.41 5.73 96.99
sw_6_scaffold_17695 3 1010 bp 53.17 5.74 79.50
sw_6_scaffold_12879 1 1271 bp 35.88 5.74 55.23
sw_6_scaffold_13971 2 1201 bp 46.38 5.75 70.44
sw_6_scaffold_11969 1 1339 bp 39.36 5.75 61.84
sw_6_scaffold_9791
Domain: Bacteria (50%)
4 3394 bp 48.56 5.75 92.28
sw_6_scaffold_17357
Species: Niastella koreensis (50%)
2 1025 bp 38.73 5.76 74.93
sw_6_scaffold_26720
Species: Flavobacteriales bacterium BRH_c54 (50%)
2 1371 bp 44.13 5.76 79.21
sw_6_scaffold_14648
Genus: Halococcus (50%)
4 1164 bp 62.29 5.76 78.35
sw_6_scaffold_14950 3 1145 bp 57.29 5.76 55.02
sw_6_scaffold_12229 2 1319 bp 49.81 5.76 95.75
sw_6_scaffold_11543
Species: Natrinema altunense (100%)
2 1371 bp 63.75 5.76 71.12
sw_6_scaffold_25189 3 1387 bp 46.43 5.77 61.86
Displaying items 1001-1050 of 15674 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.