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sw_7_scaffold_10598_1

Organism: SW_7_UNK

megabin RP 50 / 55 MC: 47 BSCG 50 / 51 MC: 41 ASCG 38 / 38 MC: 37
Location: 3..659

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 218.0
  • Bit_score: 385
  • Evalue 4.30e-104
tRNA-splicing ligase RtcB n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRR2_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 218.0
  • Bit_score: 385
  • Evalue 3.10e-104
rtcB_1; RtcB-like protein 1 similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 218.0
  • Bit_score: 385
  • Evalue 8.70e-105

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Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 657
CCGGACAAGGAGCTGGCGGCGGCGCCGGCCGGCTCGCAGCTGGCGGAGGACTACTACGACGCGATGTGTGCGGCCATCAACTTCGCGTGGGTCAACCGCCAGCTCATCACCCACCGGACGCGGGAGGTGTTCGCCGACGTCTTCGAGACGCCCTGGGAGGACCTGGAGATGGAATTGCTGTACGACGTCGCCCACAACATCGCCAAGAAAGAAACGCACGACGTGAACGGCGAGGACAAGGAGCTGTTCGTCCACCGGAAGGGCGCGACCCGTGCCTTCCCGGCCGGCCACCCTGAGGTGCCGAAAGCTTACCGGGACGTCGGTCAGCCGGTCATCATCCCCGGGAGTATGGGCGCGGGCTCGTACGTGCTATGCGGCGGCAGCGAGTCGATGAACGTCTCGTTCGGGTCGACGGCCCACGGTGCGGGGCGGCTGATGAGTCGGACGAAAGCCAAAGACGAGTTCTGGGGCGGCGACGTCCGGGACGATCTGCGGGAGACCAACCGCATCCACGTGAAGGCACAGAGCGGCGCGACAATCGCCGAGGAGGCGCCGGGCGTGTACAAGGACGTCGACGAGGTGGTCCGGGTGAGCGACGAGCTTGGCATCGGCGGCAAAGTGGCCCGCGTCTACCCGGTCTGCAACATCAAGGGCTGA
PROTEIN sequence
Length: 219
PDKELAAAPAGSQLAEDYYDAMCAAINFAWVNRQLITHRTREVFADVFETPWEDLEMELLYDVAHNIAKKETHDVNGEDKELFVHRKGATRAFPAGHPEVPKAYRDVGQPVIIPGSMGAGSYVLCGGSESMNVSFGSTAHGAGRLMSRTKAKDEFWGGDVRDDLRETNRIHVKAQSGATIAEEAPGVYKDVDEVVRVSDELGIGGKVARVYPVCNIKG*