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sw_7_scaffold_12766_1

Organism: SW_7_UNK

megabin RP 50 / 55 MC: 47 BSCG 50 / 51 MC: 41 ASCG 38 / 38 MC: 37
Location: 1..513

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta'' {ECO:0000256|HAMAP-Rule:MF_01324}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01324};; PEP {ECO:0000256|HAMAP-Rule:MF_01324}; Plastid-encoded RNA polymerase subun similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 156.0
  • Bit_score: 137
  • Evalue 1.60e-29
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034B2CDD similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 168.0
  • Bit_score: 130
  • Evalue 1.80e-27
rpoC2; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 167.0
  • Bit_score: 128
  • Evalue 1.90e-27

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Taxonomy

Nephroselmis astigmatica → Nephroselmis → Nephroselmidophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 513
AAACAATTTTACCATAATCCAAAAACACTTAGTGTTAAAAACTTTTTCTTTTTTAGGAAAAAAGGTTTATCAGCTTTCATATCAAGTTTTCTTGCAATTCGAAATGTACAGAATCTTTGTGTTCATAGTATTCAGAGAGTTTATCAATCACAGGGTATTTCGTTATCAGATAAACATGTGGAAATCATTGTTCGTCGTATGACTTCATACGTATTGATGCTGCATCCTGCAAATACTTCATTTTTACCTGGTGAAATTGTGCAATATCAGCTATTACAAACACATAGCTTTACAAATACTATATTTATACCGTATATCGTTGGTATAACAAAAGTGAGCTTGTCAAACTATCGTACATCGTTTTTATCTGCAGCAAGTTTTCAAGAAACTCGCCGAATTTTAATGAATTCAGCTCTTGAAGGATGTATTGACTACCTTGATGAACTTAAGCAACCAGTAATCTTGGGTAAAACAATACCAGCTGGCATTGCCTTCTTCTATGAAGGCGTTTAG
PROTEIN sequence
Length: 171
KQFYHNPKTLSVKNFFFFRKKGLSAFISSFLAIRNVQNLCVHSIQRVYQSQGISLSDKHVEIIVRRMTSYVLMLHPANTSFLPGEIVQYQLLQTHSFTNTIFIPYIVGITKVSLSNYRTSFLSAASFQETRRILMNSALEGCIDYLDELKQPVILGKTIPAGIAFFYEGV*