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sw_7_scaffold_2746_14

Organism: SW_7_UNK

megabin RP 50 / 55 MC: 47 BSCG 50 / 51 MC: 41 ASCG 38 / 38 MC: 37
Location: 14271..15011

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1MYQ3_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 219.0
  • Bit_score: 227
  • Evalue 1.20e-56
Plastid ribosomal protein L3, imported to chloroplast, large ribosomal subunit {ECO:0000313|EMBL:ABO94345.1}; TaxID=436017 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophycea similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 236.0
  • Bit_score: 227
  • Evalue 1.70e-56
50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 216.0
  • Bit_score: 188
  • Evalue 1.80e-45

Lists

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Notes

Euk Jill Banfield (1/30/15)

Taxonomy

Ostreococcus 'lucimarinus' → Ostreococcus → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 741
ATGCAGCGCCTGAGCGAGCAACGCACGCGCAGGCAGACAAGAGCGCGCTGCGCACGCACGGCGCAAGCAGCAGCGCTGGAGCCCGGCGTGGGAGTGTTTGGGAACAAGGCGGGGATGACGCAGATCTTTGAGGACGGCGGGAGCACCTGCACCCCCGTCACTGTGATCAAGTTCGAAGGAACCGGCAACGTGGTCACGCAGCGGAGGCGCCGCCCCGAGGATGGCTACAATGCCCTCCAGCTCGGCTACGGTGACGCCAAACCCGGCCGGCTCACCAAGCCAGAGCAGGGCCACCTAAACAAGGCCGGCGCGCCGCCTCTCTCACATCTTGAGGAATTCCGCCTCCGCTACACCCGCCAGGTGGACGAATATTCTGTTGGCGACATTATCGACCCCTCCTCCCTCTTCCAATGTGGCGATGTTGTCGACGTGCAAGGCTCCACAATTGGCCGCGGCTTCCAAGGCGCCATCAAGCGCTGGAACCATTCCCGCGGGCCCGAGTCCCACGGCAGCAAGAACATTCGCGAGCAGGGCACCATGGGTGGACGCACACCCAAGCGCTGCGTCCCTGGTAGGCAGCAGGCGGGCAGGATGGGCAACCGCACCGTCAAGCAGCAGCGCCTCGTCGTAAAATCCATTGCGTCCGACCATATGGTGGTGAAGGGCAACGTCCCGGGCAAGGCTGGCAACCTCTTGCGCATCACCCCCGCGAAAATCATTGGCTACACAGTCAGGGGATAA
PROTEIN sequence
Length: 247
MQRLSEQRTRRQTRARCARTAQAAALEPGVGVFGNKAGMTQIFEDGGSTCTPVTVIKFEGTGNVVTQRRRRPEDGYNALQLGYGDAKPGRLTKPEQGHLNKAGAPPLSHLEEFRLRYTRQVDEYSVGDIIDPSSLFQCGDVVDVQGSTIGRGFQGAIKRWNHSRGPESHGSKNIREQGTMGGRTPKRCVPGRQQAGRMGNRTVKQQRLVVKSIASDHMVVKGNVPGKAGNLLRITPAKIIGYTVRG*