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sw_7_scaffold_1998_4

Organism: SW_7_UNK

megabin RP 50 / 55 MC: 47 BSCG 50 / 51 MC: 41 ASCG 38 / 38 MC: 37
Location: comp(1202..2080)

Top 3 Functional Annotations

Value Algorithm Source
truB; H/ACA RNA-protein complex component Cbf5p (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 292.0
  • Bit_score: 451
  • Evalue 2.20e-124
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 292.0
  • Bit_score: 451
  • Evalue 1.10e-123
Probable tRNA pseudouridine synthase B n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMV7_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 292.0
  • Bit_score: 451
  • Evalue 8.00e-124

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Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 879
ATGCGCGAGCGCGGGCCGCCCGCCGAGCGCGACCCGGCCGAACTGCTGTCGTTCGGCGTCGTCAACCTCGACAAGCCGCCGGGGCCGTCGGCCCACCAGGTCGCCGCCTGGGTCCGGGACGTCGCCGGTGTCGAGCGGGCCGCCCACGCCGGCACGCTGGACCCGAAGGTCACGGGCTGTCTGCCGGTGTTGACCGGCGACGCGACCCGGCTGGCGCAGGTGTTCGACGACGCCCGCAAGGGCTACGTCGCCGTCCTGGAACTCCACGCCCCCAGGCCGACGGACTTCGAGGCGATCCTCGCGGAGTTCGAGGGCCCGATCCACCAGAAGCCGCCGCGGAAGTCCGCCGTCGCCCGCCGGCTCCGCACCCGGACGGTCCACCGACTCGAGGCGGTCGAGAGCCAGGAGCGTCGCGCACTCCTACACGTCGAGTGCGACAGCGGGACCTACGTCCGGAAGCTCTGCCACGACCTCGGGCTCGCGCTGGGCACCGGCGCGAACATGGGCGAGCTCCGACGGCGCCGCACCGGGACGTTTGACGACACCGGCCTCGTCACCATGCACGATCTGACGGACGCCGTCGCGTTCTGGGAAGAGGACGGGGACGCCGATCTCCTTCGGGCGGTCGTCCGGCCCGCCGAACGCGCCCTCCGGGGGCTCCCCCAGCTCACCGTCGCCCCCTCGGCCGCCGCGGAGATCGCGAACGGTGCGCCGGTGTACGCCCCGGGCGTCGTCGAGCACGACCTCGAGGGCGCCGCCGAGGGGGCGCTGGTCGCCTGCTACCCCCCCGACGGCGCCGCGGTGTGTCTCGGCTCGCTGGCCGGCGACCCCGGCGCCGACGAGGGGCTGGTCGCCGACCTCGAGCGGGTGCTGGTGTGA
PROTEIN sequence
Length: 293
MRERGPPAERDPAELLSFGVVNLDKPPGPSAHQVAAWVRDVAGVERAAHAGTLDPKVTGCLPVLTGDATRLAQVFDDARKGYVAVLELHAPRPTDFEAILAEFEGPIHQKPPRKSAVARRLRTRTVHRLEAVESQERRALLHVECDSGTYVRKLCHDLGLALGTGANMGELRRRRTGTFDDTGLVTMHDLTDAVAFWEEDGDADLLRAVVRPAERALRGLPQLTVAPSAAAEIANGAPVYAPGVVEHDLEGAAEGALVACYPPDGAAVCLGSLAGDPGADEGLVADLERVLV*