ggKbase home page

sw_7_scaffold_252_14

Organism: SW_7_UNK

megabin RP 50 / 55 MC: 47 BSCG 50 / 51 MC: 41 ASCG 38 / 38 MC: 37
Location: comp(14859..16097)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretory pathway family protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1MRV0_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 346.0
  • Bit_score: 257
  • Evalue 2.40e-65
Type II secretory pathway family protein {ECO:0000313|EMBL:EEH57029.1}; Flags: Fragment;; TaxID=564608 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mami similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 346.0
  • Bit_score: 257
  • Evalue 3.30e-65
secY; preprotein translocase subunit SecY similarity KEGG
DB: KEGG
  • Identity: 28.1
  • Coverage: 417.0
  • Bit_score: 165
  • Evalue 3.50e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonas pusilla → Micromonas → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1239
GTGACGGTGGTCTGCGTGCTCGTGTACAGAGCTGGGTACTTCAAGCGGTTGCCCGGAGTAGGCGGAGAGGCGGGCAAGAGGCCGCTTGGAGATGTGATGGACTTCATACTACCCGCAAGCGAGTCACTCACTGTGGCACGGAGTGGCGCGTCCGTGCTTTCGCTGGGTTTCACACCATACATATCCGCCTCCATCCTCGTGCAGATCCTCTCCTCCCTTGATGCCGTCCGCCAGTACCGCAAGGAGGATGCCTCTGAAGCCACTGATGCGCTCAAGCAGCTCACACGCCTCTTCACCCTCGCCATCGCTCTCTACCAAGCTTTCGACGTCGCTTTGAAACTCAAGCCGCTCGCCGATCTCTCTGCCTTCTCTTTCAGCGAAGCCAAATTTGTCTGGGAAACAACAGCTCTCCTTGTTGCTGGCGCCTGCTTGGTCAGCCACCTTGCCGAGCGCGTCACCGAGCAGGGCATTGGCCAGGGCGCCTCCGTTTTCATCTCCACCTCCATCCTTTCCGGCTTCGCTTCTTCAAGCGTAAAGCTCTTCAACAACTTCCTTGCCGGCAACCTCGCCCCTGTAGAATTCGCTGCTTGCTCTGCCGCCTTCGTTGCCTTCATTGCTGGTGCCATCCTCTTGACTGCAGGCGTTGTAAAAGTGCCCATGGTCTTCTTCCAGGCCACCTCATCCAATATCCCCGGCGTTCCAAAGTCACCGCGAGGCCGTGACGATCACATCCCTTTCAAGCTCAACCCACTTAGCATGCAGCCGGTGCTCATTGCCCTCTACGTGCTCCAAGTGCCTCAATGGCTTGCTAATATCGCGCCTGGTAACGTGATCACAACCAGCCTTGCGCTTCTTTTCTCGCCTGGTGGCGCCGTGTACTACGTCTTGCTCTTCACAATTGTGTTTGCCGCGACTTTCATCGACTTCGAGGACTTCCCCAGTGAAATCAACGAGTACATGCTCAAGATTGGTGCGCGAGTTCCGTACGTGCGTCCCGGTTCGCGGAGCGTCGAATACTTCAAGCGAGTACAAGACGGCGCACGCTTCTGGGGCGGCCTTCTGCTTGGAGGGCTTGCAACGCTTGCCGTGGCCCTCGACAACCTCTTGCTCGTCCGTTTCGGAACGAGCTTTGGCCTTACATCTACACTCATCCTAGTGAGCACTGTCCTGCAGATTCAGCGTCAAATCTTGTCACTCCGTGAAGATCCTCGTGCTCAACGAAGTGCTCAAAAGCTCTAA
PROTEIN sequence
Length: 413
VTVVCVLVYRAGYFKRLPGVGGEAGKRPLGDVMDFILPASESLTVARSGASVLSLGFTPYISASILVQILSSLDAVRQYRKEDASEATDALKQLTRLFTLAIALYQAFDVALKLKPLADLSAFSFSEAKFVWETTALLVAGACLVSHLAERVTEQGIGQGASVFISTSILSGFASSSVKLFNNFLAGNLAPVEFAACSAAFVAFIAGAILLTAGVVKVPMVFFQATSSNIPGVPKSPRGRDDHIPFKLNPLSMQPVLIALYVLQVPQWLANIAPGNVITTSLALLFSPGGAVYYVLLFTIVFAATFIDFEDFPSEINEYMLKIGARVPYVRPGSRSVEYFKRVQDGARFWGGLLLGGLATLAVALDNLLLVRFGTSFGLTSTLILVSTVLQIQRQILSLREDPRAQRSAQKL*