ggKbase home page

sw_7_scaffold_5_3

Organism: SW_7_UNK

megabin RP 50 / 55 MC: 47 BSCG 50 / 51 MC: 41 ASCG 38 / 38 MC: 37
Location: 2447..4120

Top 3 Functional Annotations

Value Algorithm Source
IS1341-type transposase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JTF5_NATP1 similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 501.0
  • Bit_score: 321
  • Evalue 2.40e-84
transposase, IS605 OrfB family, central region similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 501.0
  • Bit_score: 321
  • Evalue 6.70e-85
IS1341-type transposase {ECO:0000313|EMBL:ELY69393.1}; Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:AGB33902.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrial similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 501.0
  • Bit_score: 321
  • Evalue 3.30e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natrinema pellirubrum → Natrinema → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1674
ATGCCGAGTCCAATGGCAGGGTTTAAACGTCTACACACAGTATTATCAGAAAAGATGGCCAATCAAGCAGTACTGTCACAATCACTCTATCTTGGATACGACAAGAACCTGGTTAAACTCATCAAAACAAGTCACAGAATCGCCCAAACCTTCCTCGAAAACAACTCAACAGAGAACCTCCTTGAAGACTACAAAGAATGGAGAGAAACAACAAACACTAAACCGCACAACTTCTTCCGCCAAACCAATAAGTACGCTCCATTCGAGCCTGAAGACTCATACTATTATAGTCGGTTTAAACGATGCACGTACGCTCTTATCGCACGGCAGTTAGAAACCCACGCGAGCAAGCATACTGCCTTCCAGTTCCTTCAGGACGAGTACTCAAAACACGACACGTACAGCGCACTCGAAGACGAGCTATTCGACCAGGACGACTTCGTTAACTACGATTCTTTCAAACAAGCACACACCGAGTACGAGAAATATATCTCGAAGACAGGCAGTGAGCCAAGCAAGTACACAGACCTGAACACGATTCGAAAGATTCCATTCCAACTACCACTCGCACCAGACGACAATCGTATCCACGACCTCGAAATCAACGAGAACACGCTTGCCCTCTCGGTCAAGACGCCTGATTGTCAGAACCCTGACTCGTACCATGATTACAGTGAGACAGAGGTAACAGCGCCACTGTACCCGCACGTGAACGAACTCCTCCAAGTCGGAGACGCGTGCAAGCCAACCATCCGCCTCTCTAGTGGCGAACTACACCTCGACCTTCCAATCGAAATAAATACCACGGAATTCGACTCTGTCGAAAACAAGACATTGGCATGCGACCTGGGTGTGAAGACCCAGGTTACGAGCACCGTCGTACGCGGAACGGACGAGAACCACTTACACCAGGAGAGTCGACCCGACTTCTACGACCATCCGCTGAAGCAAAAGCTCAATCGCATTATTGACAACAGGAAGAACGTTCGAACGAATACACCACAACACGATTGGTTGGCCGACCGCGAAACGAATCTGAGAGGCCAAATCCAACATGATGCCTCGAATTACCTTGTAATTCGGGCGCTTGTCAACAAGTGTTCGAAGATAATCCTCGAAGACCTGTCTGGTTTAGAAGCACCGAATGGGTTAGCGGAGATGAGTCGCCAGGTTAGTAGTTGGGCAAGGGGCGACCTCTTGGAGAAAATTAAGTACAAGGCTGAGTTGGTAGGATTGGAAGTGGAGTTGGTTAACCCGTATGGTACGTCGCAGCACTGCCCTCGCTGTGGTGAGCACGGTGAGCGAGTGAAGGCCTCGAACGACCTCACCGAAGACGAAGCTGGTGGCTGGTTCTACTGTGACCAGTGTGGGTTCTCGGGTGACCGAGATTACGTTGGCTCGTTGAATGTTGGGAGAATGTACTTGTCTCCAACAGATAGGATACAAGCGTGTAAACCTGTTGAGTATATCTCGCCAGGTAATTCGTACGCTAGGTTTGTATCCGAAGCTGTTGAAGTGGATGAGTGTCGTTCTCCTAGTGTTCAACCAGCTATAATCCAGTCCGAGGAACTGTTTGAGGCAGAGGCTGGTGATGAGTGTTGTAAAAAGCGAAGTGGTGTGACGGGGCTCGCTCTCAGCCCTGTACAGCTTGTACTATCAAATCATACTACATAA
PROTEIN sequence
Length: 558
MPSPMAGFKRLHTVLSEKMANQAVLSQSLYLGYDKNLVKLIKTSHRIAQTFLENNSTENLLEDYKEWRETTNTKPHNFFRQTNKYAPFEPEDSYYYSRFKRCTYALIARQLETHASKHTAFQFLQDEYSKHDTYSALEDELFDQDDFVNYDSFKQAHTEYEKYISKTGSEPSKYTDLNTIRKIPFQLPLAPDDNRIHDLEINENTLALSVKTPDCQNPDSYHDYSETEVTAPLYPHVNELLQVGDACKPTIRLSSGELHLDLPIEINTTEFDSVENKTLACDLGVKTQVTSTVVRGTDENHLHQESRPDFYDHPLKQKLNRIIDNRKNVRTNTPQHDWLADRETNLRGQIQHDASNYLVIRALVNKCSKIILEDLSGLEAPNGLAEMSRQVSSWARGDLLEKIKYKAELVGLEVELVNPYGTSQHCPRCGEHGERVKASNDLTEDEAGGWFYCDQCGFSGDRDYVGSLNVGRMYLSPTDRIQACKPVEYISPGNSYARFVSEAVEVDECRSPSVQPAIIQSEELFEAEAGDECCKKRSGVTGLALSPVQLVLSNHTT*