ggKbase home page

sw_7_scaffold_724_11

Organism: SW_7_UNK

megabin RP 50 / 55 MC: 47 BSCG 50 / 51 MC: 41 ASCG 38 / 38 MC: 37
Location: comp(9379..10020)

Top 3 Functional Annotations

Value Algorithm Source
tRNA processing endoribonuclease Trz1 n=1 Tax=Byssochlamys spectabilis (strain No. 5 / NBRC 109023) RepID=V5GE19_BYSSN similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 111.0
  • Bit_score: 79
  • Evalue 3.50e-12
Ribonuclease Z {ECO:0000313|EMBL:JAC74764.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" source="Tetraselmis sp similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 81.0
  • Bit_score: 82
  • Evalue 7.60e-13
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 90.0
  • Bit_score: 75
  • Evalue 2.10e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 642
ATGCGCTTCAAGCAACGTGTGCGGCGTCGCGAGCAGCCCGAATGCTCGAACTCGTGGATTTTTGACGACTCGGAATGCCCGGAGGATGAAGAATGGAAAAACTTTAACACAAACGCTGCGGAAGCATATAAGAGGGAAAGCTGCTCTGCAATTGGTACCATCAATGGAGGTGCAGATAATGCCGGTGCAGAGTTGCACCGAAAGCACCAACTACATTTCATTGGAACTGGCAGTGCGGAACCTACCAAATACAGAGGGCCCTCAGCAATCATGCTTCAAGTCGTTGGTTCTCGCGTGCTGCTTGAGGCAGGTGAGAACACCGTTGGCGCTTTAGAGTTCCTTAGAGGAAAAGAGCTGGCAACGAATGACCTCTACGAATTGTCGTGTATTCTCATTTCTCACTCGCACGCTGACCATATTTTGGGGCTTCCGTCAATCGTGCGGAAATGGCAGGCGCTTCACGCAGGAGATGACAACAAACTCACGCAGGAGATGACAACAGACTTGCCGATGATCAAAATCGACACACGCTCACCGTTGTTGGCCCAAGCTCCGCAGAGAAGCTGCTGGATGCCTTCGGGCTGCTTGACGGTGGAAATGTGCACTTTAATCGGTGGGCGTTTGGTCAGGAACAAGTGCTGA
PROTEIN sequence
Length: 214
MRFKQRVRRREQPECSNSWIFDDSECPEDEEWKNFNTNAAEAYKRESCSAIGTINGGADNAGAELHRKHQLHFIGTGSAEPTKYRGPSAIMLQVVGSRVLLEAGENTVGALEFLRGKELATNDLYELSCILISHSHADHILGLPSIVRKWQALHAGDDNKLTQEMTTDLPMIKIDTRSPLLAQAPQRSCWMPSGCLTVEMCTLIGGRLVRNKC*