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sw_8_scaffold_1190_16

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(13653..15830)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=71139 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; similarity UNIPROT
DB: UniProtKB
  • Identity: 32.1
  • Coverage: 697.0
  • Bit_score: 307
  • Evalue 6.50e-80
Topoisomerase IA (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 348.0
  • Bit_score: 207
  • Evalue 1.40e-50
DNA topoisomerase n=1 Tax=Oryza sativa subsp. japonica RepID=C7J0A2_ORYSJ similarity UNIREF
DB: UNIREF100
  • Identity: 32.1
  • Coverage: 722.0
  • Bit_score: 304
  • Evalue 3.90e-79

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Taxonomy

Eucalyptus grandis → Eucalyptus → Myrtales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 2178
TTGGCCCATGCCAATTCCCAACCCTCGGCTTCATCGTGCAGCGCTGGTGGGAGCACCAGGCGCACACGCCTGAGGACTTTTGGCGCATCAAACTCGAGCACACGTTTGCTACTTGTTATCTCTTGGTCCCTCCTCATACACTCTGTACTCCGTCTGCCTTATCCTCTTCGCCACTGTACCCGTTGTTGCAGGCCAGCTGGATGTCAAGGAACAGCATACTTTAGTTGGGATCGAGGACGAGCTTTTGATCCGCTTGTCGCAGCTGTAATTGAGGATGACCTTGTATCCTGCAACAGAACGTTCGAAGTCCTAAGCTCCACCGGCAAGAGAGTCACACGCAATCCACCGGAACCATTGAACACTGTTGAGCTCCAGAAGCGTGCTTGTCGGGTCACACGCGCAAGTCCGCATCAGGTATTACAGTGGGCTGAGGAGCTGTACCAGTCAGGGTATATCTCATATCCGCGTACGGAGACGAACAAATACCCAAGCACCTTCGACTTGAACGCCATCACACATGAGCTCACAAATCACGGCCACTTTGGGCAGTATGCGCATTCCCTACTCAGCCAAGGCCTATCGCGACCGCGTGCTGGAAATCAGGACGACGGAGCTCACCCTCCCATCTATCCCGCAAAGCACATTGATCCAAATTCAATTGGAGGGCAAAGTAATGGCAAGTATCTTGTGTACGAGCTCGTCGCGCGACACTTTCTTGCAACTGTATCTCCGCTAGCGGTTGGCCGGTCGACTGAAGTTAACGTGCAATGTGCGAGCGAGACCTTTACAGCGAAGGGCTTATGCATTGAGCGACATGGCTATTTGAGTGTTTATGGCCCGAGCTCACAATTCAATGTCTCGTTCGATCGTTGGTCAGGCTCCGGTGATCTGCCACGGAAGTACACGCAAGGTGAGGTGCTGCAGGCGACACGAGTAAGCTTAGAGGAGGGAAAAACAGAACCACCAGCGCTACTAACCGAGCCTGAGCTCATCTCAGCCATGGATCGAGCGCAAATTGGCACAGATGCTACGCAAGCTGCACATATCGAGAAGGTTGTTGGAGAGCGCGGATATGCGGAGAGGACCGCCGGTGACCGCTTGAAGCCAACAAACCTTGGAGAAGCCCTGGCGTACGGCTATAAGCAGATAGGCCTGCATGAGGTATGGCGCCCGGATTTCCGAGCAAAGATGGAAGCGCAGGTGAATAGCATCGCAACAAATCAGTCTACGTCCCACCCGCAGTGGCATGACGTCCTGCAAAACCTTCTCAGTGAGAGTGTGACGCAATACACCACGGCATCCGCGGGAAAACAGCAGCTTGAGTCGTCCTTGACAGCTTTACTTGGGCAGGCGAGCAGAAGTGCTCAGCCATCATCCTTCAGTCTTGGGCTATGTCCATCTGGATGTCGGGATGAGATATCCGTTCGACGTGAGCGTGACGGAACGTGGAGAGTTGCGTGCGCTTGTCGACCACGTAACAAAGATTTGGAACTTGAACGATTGCCAAAGGTAGCCGGAAACTTGTGTGCATCCGCAAATGTGTGTCAGCAGCCAACGTGCACCGCTGTTGGCAGCCTCAACTTGCTGCACTTTAGCCTGCCCGCTGACGTGCTTCACCCAAACGAGTCGCGATATTCTGCTGGTGTCGACCTTTGCGTCTTCTGTGAGCAAGCGGCTGCTTGCACTGCTGCACGTGTGTTAAGGGATCAGGAGCGAGCTTGCAATCAGCAAAGAGAGCAGCCTTACGCGTATCAACAGCGAGCACAACAGCCTCCTGATCATCAAGCGCCATTGCAAGCTCAGCAACAGCTGCCAAATGCTCATTTCACATCCATACAATCGAACTCACAGTGGCAGGCTCAACCAGCGCAACAGCATGGGCAGGGCCATCCGCCGCGCAGCTCTGGGCGCAGTGGCAGCATGGGACGGCAGGGATCAAGCACTGGTCGAGGCACCACGGGAAGAGGAAAGCAAAGCAGTGGTGGCCGAGGCGATGTATCTGGTGGCAACAGAGCGGCTTCTGCTGGCGGTGCGTCGTCACAAGCCCAAGCGTGCAAAGGACGCATGGGAAGTCGTGGCGTGCGAGGTAGAGGACGCAAAGGTGGCAAGAATAGCAAAGGCTGCTTCAAATGCGGAGCCAAAAACCATTGGGCGAACAGTTGTCCACAATCCAATTAA
PROTEIN sequence
Length: 726
LAHANSQPSASSCSAGGSTRRTRLRTFGASNSSTRLLLVISWSLLIHSVLRLPYPLRHCTRCCRPAGCQGTAYFSWDRGRAFDPLVAAVIEDDLVSCNRTFEVLSSTGKRVTRNPPEPLNTVELQKRACRVTRASPHQVLQWAEELYQSGYISYPRTETNKYPSTFDLNAITHELTNHGHFGQYAHSLLSQGLSRPRAGNQDDGAHPPIYPAKHIDPNSIGGQSNGKYLVYELVARHFLATVSPLAVGRSTEVNVQCASETFTAKGLCIERHGYLSVYGPSSQFNVSFDRWSGSGDLPRKYTQGEVLQATRVSLEEGKTEPPALLTEPELISAMDRAQIGTDATQAAHIEKVVGERGYAERTAGDRLKPTNLGEALAYGYKQIGLHEVWRPDFRAKMEAQVNSIATNQSTSHPQWHDVLQNLLSESVTQYTTASAGKQQLESSLTALLGQASRSAQPSSFSLGLCPSGCRDEISVRRERDGTWRVACACRPRNKDLELERLPKVAGNLCASANVCQQPTCTAVGSLNLLHFSLPADVLHPNESRYSAGVDLCVFCEQAAACTAARVLRDQERACNQQREQPYAYQQRAQQPPDHQAPLQAQQQLPNAHFTSIQSNSQWQAQPAQQHGQGHPPRSSGRSGSMGRQGSSTGRGTTGRGKQSSGGRGDVSGGNRAASAGGASSQAQACKGRMGSRGVRGRGRKGGKNSKGCFKCGAKNHWANSCPQSN*