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sw_8_scaffold_1720_4

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: 1569..3413

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Populus trichocarpa RepID=U5G7U4_POPTR similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 600.0
  • Bit_score: 290
  • Evalue 3.80e-75
Dna mismatch repair protein msh6-2 {ECO:0000313|EMBL:JAC60128.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 574.0
  • Bit_score: 351
  • Evalue 2.50e-93
DNA mismatch repair protein MutS similarity KEGG
DB: KEGG
  • Identity: 33.4
  • Coverage: 380.0
  • Bit_score: 151
  • Evalue 5.90e-34

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1845
ATGAGGCGCGATCGCAACGATGGCGAAGACGCACATCCAAGCGGGGACGATCCGGGCGATCGGGGCCAAGAGCGTGATGATGGCCTTGCGGAGGTTGCTACCGTTGCGACTGAGCGCCCGCTGAAAGCGCAGCGGAGCGTTCTGCAGCAAAAGCTGGAAGGAGCCGAGCTGAAGGAGGAGGCCAAGCGCAAAGAAGTTGAGCAGCGCTTTTCCTGGCTCGAACCTGGGCGCGTTCGCGACGCCCATGGCCGCCCAGAGTCGCACCCTGAGCACGACCCGCGCACGCTACAGCTCCCGCAGAACCTCAAGCTGTCGTCTTCGCAGCAGCAGTATTGGCAGCTGAAAAAGCGCTATCGAGACGTCATCCTCTTCATCCGCATCGGCTCGTTCCACGAGCTCTACGGAGAAGACGCCGAGGTTGGCGCTCGCGAGCTTGGGTGGAAACTCACTGTTAGCGGCGTTGGCAACTGTAAGCAAGTCGGCTGCCCGAGCAGCAACGTCGATGCTGCAGCTGCCGCACTGGTCGCCAAAGGCTACAAAGTGGCGAAGATTGAGCAAATGGAGACTGCAAAGCAAGCAAAAGATCGCGTCGGCAGGAGCTCCGCTTGTATCCACCGCGAGCTTGTTGCAGCGCACTCGCCTGGAATGCTTACAGAGGGTGCACTTGATGGCGCTTCGTTGCCGAATGCAGCCGTCCATGTGCTCGCACTCTGTGAGTGCGACAGCCAGATTGGTTTCGCATTCCTTGAAGCAGCAGCTGGTCGCGCATTTGTTGGCTCATTGCCTGACGATGAGGACAAGAGCTCCCTCATAGCGTTGCTTGGGCAGATTGAGCCGTCTGAGGCGCTCTTCCCTAAGGACTCGATTTCCTCAGGGACCAAGCATTGCTTGCGCTACTACACAAGCTCGCTCACAGCTCTTGAGCCAACTACAGAATGTCCACAGCCACCTCACGATCGCAGCGCTGCGATGGACTATGTTAGTACGACAAGGTTTGCTCCAAGCGCCGATGCTTCCTCATGGCCACACGCAATGAGAAACGCTCCAGCTCAGACTCTGAGTGCACTCTGTTGCTTGAGTAGCCATCTGCGGCGAATGATATCGGAGCGCGAGCTTGCGGGCTCAGCGGAAGTCCTTCCATATGAGGTGCATGGAGGCTCGCTCCTTCTTAAGGGGCGTACTGCAATGAATCTCGAGCTTGCGGGGTTCAGGGGCTCGGTTCTCTCATATCTTGATCGCTGCTGCACTGGAGCTGGTGAGCGAACGCTGAAACGATGGCTGATGCGGCCGTTGCGCAGCGCGAAGCAGATAGAGATACGCCAGGGTGCTGTTGCCGAGCTCATGCAGAGTGACGATCTTTTGCAAGCTATCAGGGCATCACTTGGCAAGTGCACAGACGTTGAGCGCGCTCTTGGCCGCTTGCGAAGCCAGCGCGTACATCTACCGGACGGTCTTCCGGATGATCTGCTGTCAAAGAGAAGAAAGAAGCGCCATGATGCAATCACAGCAGCCGAACACGCAAGCGCTGCCGCTGCGGACGTGTTTGGTAACATTGTATCTTACTTGAGCAGCACAAGCCATGCTAAGAGCGAAAAACTGAAAGAAATAGCAAAGGCGCATCTACAAGCCCAAAACGTTGCAGCAAGCGCTAAAGCTGGGCGAAACTTAGATGATGCAGACGACGAGAGCGTCTTGTCCACAATCGAAAGCATCTTGGAAGACCAGGCTTCGATGCGTCATGTGGCCGAGGCCGTTGCGGAACTCGATGCCCTAACGTCGCTTGCGCTCTTCGGAATGGACACCGGAGGTCGAGGACCAATGTGCCTACCCAGAGTACGTNNCTAA
PROTEIN sequence
Length: 615
MRRDRNDGEDAHPSGDDPGDRGQERDDGLAEVATVATERPLKAQRSVLQQKLEGAELKEEAKRKEVEQRFSWLEPGRVRDAHGRPESHPEHDPRTLQLPQNLKLSSSQQQYWQLKKRYRDVILFIRIGSFHELYGEDAEVGARELGWKLTVSGVGNCKQVGCPSSNVDAAAAALVAKGYKVAKIEQMETAKQAKDRVGRSSACIHRELVAAHSPGMLTEGALDGASLPNAAVHVLALCECDSQIGFAFLEAAAGRAFVGSLPDDEDKSSLIALLGQIEPSEALFPKDSISSGTKHCLRYYTSSLTALEPTTECPQPPHDRSAAMDYVSTTRFAPSADASSWPHAMRNAPAQTLSALCCLSSHLRRMISERELAGSAEVLPYEVHGGSLLLKGRTAMNLELAGFRGSVLSYLDRCCTGAGERTLKRWLMRPLRSAKQIEIRQGAVAELMQSDDLLQAIRASLGKCTDVERALGRLRSQRVHLPDGLPDDLLSKRRKKRHDAITAAEHASAAAADVFGNIVSYLSSTSHAKSEKLKEIAKAHLQAQNVAASAKAGRNLDDADDESVLSTIESILEDQASMRHVAEAVAELDALTSLALFGMDTGGRGPMCLPRVRX*