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sw_8_scaffold_5598_1

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(1..450)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase beta'' subunit (Fragment) n=1 Tax=Hypericum kalmianum RepID=A9XW84_9ROSI similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 154.0
  • Bit_score: 83
  • Evalue 1.70e-13
RNA polymerase beta'' subunit {ECO:0000313|EMBL:ABV65744.1}; Flags: Fragment;; TaxID=473045 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eu similarity UNIPROT
DB: UniProtKB
  • Identity: 33.8
  • Coverage: 154.0
  • Bit_score: 83
  • Evalue 2.40e-13
rpoC2, FvH4_C0017; RNA polymerase beta subunit similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 130.0
  • Bit_score: 73
  • Evalue 5.60e-11

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Taxonomy

Hypericum kalmianum → Hypericum → Malpighiales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 450
ATGAGGACATTCCATACGGGTGGTGTATTTTCTGGTGATGTTACTCAAAAAGTTGTGGCACCTTCAAATGGATACATTTATATATCATATCCGTATGGCACAAAAATTCGAACACAATTAGGTCAAAATGCTTTCTTTAGTTACACCAGCTTTTATATAGCACTTAAATGCGGTTATACTATAACGATTTACAGATTTCCATCTCAAACCTTACTCTTTCTTCCTCCTGGACAATATATACAACAAAAACAGATTATAGCAGAAGTACCGCAAAAAGCTTATCCGGATATGTATGCAGCAGAAGCACATGCTTCGCACGATACACATGAAGAGCATAACGAGGTAGAAGTGCTTTCTGACTCTAGTGGACAAGTTTATCTTCAATCACAGCACGATACACTACGTAAGCAAAAAAGCAAGTGGAAAACAACCACGGGGTGTAATCTTTGG
PROTEIN sequence
Length: 150
MRTFHTGGVFSGDVTQKVVAPSNGYIYISYPYGTKIRTQLGQNAFFSYTSFYIALKCGYTITIYRFPSQTLLFLPPGQYIQQKQIIAEVPQKAYPDMYAAEAHASHDTHEEHNEVEVLSDSSGQVYLQSQHDTLRKQKSKWKTTTGCNLW