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sw_8_scaffold_920_8

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: 4923..5963

Top 3 Functional Annotations

Value Algorithm Source
Histone deacetylase {ECO:0000256|PIRNR:PIRNR037913}; EC=3.5.1.98 {ECO:0000256|PIRNR:PIRNR037913};; TaxID=13333 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 337.0
  • Bit_score: 526
  • Evalue 3.20e-146
Uncharacterized protein n=1 Tax=Amborella trichopoda RepID=U5DE08_AMBTC similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 335.0
  • Bit_score: 525
  • Evalue 3.90e-146
histone deacetylase similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 275.0
  • Bit_score: 207
  • Evalue 6.70e-51

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Taxonomy

Amborella trichopoda → Amborella → Amborellales → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1041
GTGTACAAGCCCGGCCGGATGACATTCAATGAGATGAGTAAATTCCACTCGGACGAGTACATCGCCTTCTTGCTCTGCATCACCCCCGAGAACCAGCACGAGCACAGCCGCCAGCTGAAGAAGTTCAACGTTGGCGAGGACTGCCCCGTATTCGATGGGCTGTACGAGTACTGCCAAACCTACGGTGGCGGTAGTGTAGGCGCCGCGCACAAGCTGAACGAGAAGACGGTCGATTGCGCTGTCAATTGGGCAGGTGGGTTGCACCACGCGAAAAAGTCCGAAGCCAGCGGCTTCTGCTACGTGAACGACATCGTTCTTGCCATTCTCGAGCTGCTCAAGTACCACCAGCGGGTGCTGTACGTGGACATTGACATCCACCACGGTGACGGCGTGGAAGAGGCTTTCTTCACGACCGATCGTGTGATGACGGTGTCGTTCCACAAGTTCGGTGAGGGCTACTTCCCTGGTACCGGGCACCAGGACGACATCGGCTACGGCGACGGCAAGCACTACGCGTTGAATGTGCCGCTGAACGATGGCATCGACGACAAGTCATATGATGATCTCTTCAAGCCCATCATGCGGAAGGTGATGGAGAAGTTCCGACCGGATGCGGTGGTCTTCCAGAGCGGAACCGACTCGCTTAGCGGTGACAGACTCGGATGCTTCAATCTGTCGATCAAAGGCCACTCTAACTGCTTGACATTTATGCGAAGCTTCGACGTACCACTGTTGTTGCTGGGCGGCGGCGGATACACGATACGGAACGTGGCGCGATGCTGGTGCTACGAGACAGCGTGCTTGGCCGGAGTTGAGTTGGACGACAAGCTGCCGTACAACGACTATTATGCATACTTCGGGCCAAACTTCAGATTGCATATCCAGCCATCAAACATGCTGAACAGGAATGCGCAGAAAGACTTGGAGAGCACGCGCAACACGCTGCTGGCGCGGCTAGGGGAGCTGGAGCCAGCGCCCTCGGTGCCGTTTCAACCGACGCCAGGAGACACGGTGAGAGAAACAGCGCATACAACGTCATAA
PROTEIN sequence
Length: 347
VYKPGRMTFNEMSKFHSDEYIAFLLCITPENQHEHSRQLKKFNVGEDCPVFDGLYEYCQTYGGGSVGAAHKLNEKTVDCAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFFTTDRVMTVSFHKFGEGYFPGTGHQDDIGYGDGKHYALNVPLNDGIDDKSYDDLFKPIMRKVMEKFRPDAVVFQSGTDSLSGDRLGCFNLSIKGHSNCLTFMRSFDVPLLLLGGGGYTIRNVARCWCYETACLAGVELDDKLPYNDYYAYFGPNFRLHIQPSNMLNRNAQKDLESTRNTLLARLGELEPAPSVPFQPTPGDTVRETAHTTS*