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SW_9_UNK

In projects: SW_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 18.95 Longest contig: 153.78 Kbp Bin length: 52.88 Mbp GC content: 60.44 %
Contigs count: 21657 Features count: 72021 rRNAs count: 14 tRNAs count: 753

Genome completeness

partial RP 46 / 55 MC: 39 BSCG 39 / 51 MC: 36 ASCG 38 / 38 MC: 38
Displaying items 301-350 of 21657 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_9_scaffold_20809
Species: GWF2_Bacteroidetes_49_14_curated (50%)
2 1047 bp 41.83 3.92 100.86
sw_9_scaffold_10607
Species: Candidatus Halobonum tyrrellensis (50%)
2 2338 bp 69.55 54.11 100.86
sw_9_scaffold_7382
Species: Natronomonas pharaonis (50%)
6 1993 bp 68.04 59.16 100.85
sw_9_scaffold_33985
Order: Haloferacales (66.67%)
3 1291 bp 61.12 5.89 100.85
sw_9_scaffold_12686 4 1443 bp 44.70 4.99 100.83
sw_9_scaffold_11102 3 1568 bp 62.50 9.63 100.83
sw_9_scaffold_44849
Species: Salinibacter ruber (100%)
2 1089 bp 65.56 6.89 100.83
sw_9_scaffold_16716
Species: Haladaptatus paucihalophilus (50%)
2 1211 bp 69.53 13.54 100.83
sw_9_scaffold_16224
Species: Natronorubrum tibetense (50%)
2 1235 bp 72.87 41.62 100.81
sw_9_scaffold_18901
Species: Enterococcus faecium (50%)
2 1119 bp 54.96 9.12 100.80
sw_9_scaffold_5415
Order: Halobacteriales (66.67%)
6 2375 bp 67.12 27.54 100.80
sw_9_scaffold_13536
Species: Haloferax elongans (66.67%)
3 1384 bp 51.30 4.62 100.79
sw_9_scaffold_12529
Species: Natronomonas pharaonis (100%)
4 2143 bp 72.94 15.31 100.79
sw_9_scaffold_49496
Species: Haloquadratum walsbyi (66.67%)
3 1015 bp 67.29 8.67 100.79
sw_9_scaffold_37537
Species: Natronomonas moolapensis (100%)
2 1286 bp 75.12 42.22 100.78
sw_9_scaffold_10863 2 2474 bp 37.31 5.46 100.77
sw_9_scaffold_20781
Species: Emticicia oligotrophica (50%)
2 1048 bp 55.34 4.68 100.76
sw_9_scaffold_8559
Species: Salinibacter ruber (50%)
2 1834 bp 66.36 47.11 100.76
sw_9_scaffold_32452
Species: Halococcus morrhuae (50%)
2 1310 bp 62.67 9.69 100.76
sw_9_scaffold_14423
Order: Halobacteriales (66.67%)
3 2233 bp 74.65 15.76 100.76
sw_9_scaffold_17295
Species: Halorubrum kocurii (50%)
2 1185 bp 44.98 5.57 100.76
sw_9_scaffold_20261
Species: Natronomonas moolapensis (66.67%)
3 1066 bp 68.57 51.03 100.75
sw_9_scaffold_20194
Species: Natrialba magadii (100%)
2 1069 bp 60.15 7.86 100.75
sw_9_scaffold_16752
Order: Halobacteriales (66.67%)
3 1209 bp 71.13 42.18 100.74
sw_9_scaffold_16015
Class: Halobacteria (50%)
4 1245 bp 66.27 8.84 100.72
sw_9_scaffold_3721
Class: Halobacteria (85.71%)
7 2940 bp 69.69 55.17 100.71
sw_9_scaffold_9818
Species: Natronomonas moolapensis (75%)
4 1689 bp 75.01 14.74 100.71
sw_9_scaffold_16571 2 1695 bp 64.25 9.09 100.71
sw_9_scaffold_8465
Genus: Natronomonas (66.67%)
3 1847 bp 75.47 39.36 100.70
sw_9_scaffold_22262
Domain: Archaea (66.67%)
3 1001 bp 40.46 4.40 100.70
sw_9_scaffold_11049
Species: Halostagnicola larsenii (50%)
2 1573 bp 52.13 6.48 100.70
sw_9_scaffold_15151
Species: Natronomonas moolapensis (100%)
2 1290 bp 75.27 36.36 100.70
sw_9_scaffold_22154
Species: Halococcus saccharolyticus (50%)
2 1004 bp 74.00 33.67 100.70
sw_9_scaffold_21875
Species: Haloarcula japonica (50%)
2 1013 bp 72.66 22.31 100.69
sw_9_scaffold_14839
Species: Natronomonas pharaonis (50%)
2 1305 bp 68.05 38.24 100.69
sw_9_scaffold_27346
Species: Halobacterium salinarum (66.67%)
3 1472 bp 45.79 5.71 100.68
sw_9_scaffold_8814
Order: Halobacteriales (66.67%)
3 2652 bp 67.65 54.19 100.68
sw_9_scaffold_2669
Class: Halobacteria (80%)
5 3537 bp 66.04 12.78 100.68
sw_9_scaffold_6895
Species: Halococcus salifodinae (100%)
2 2071 bp 67.50 25.74 100.68
sw_9_scaffold_21113
Class: Halobacteria (66.67%)
3 1037 bp 70.88 15.33 100.68
sw_9_scaffold_10800
Species: Bacillus coagulans (50%)
2 3013 bp 56.29 8.60 100.66
sw_9_scaffold_20507
Species: Natronomonas pharaonis (75%)
4 1058 bp 67.58 78.83 100.66
sw_9_scaffold_20310
Species: Natronomonas moolapensis (50%)
2 1064 bp 73.31 49.72 100.66
sw_9_scaffold_16167
Species: Halococcus hamelinensis (100%)
2 1237 bp 58.04 7.92 100.65
sw_9_scaffold_7138
Order: Natrialbales (80%)
5 2033 bp 64.34 11.51 100.64
sw_9_scaffold_4455
Order: Natrialbales (75%)
4 2662 bp 70.51 16.45 100.64
sw_9_scaffold_13122
Species: Dactylococcopsis salina (100%)
2 1410 bp 44.11 137.02 100.64
sw_9_scaffold_19301 3 1103 bp 70.90 12.87 100.64
sw_9_scaffold_6935
Species: Desulfococcus oleovorans (50%)
2 5939 bp 56.78 9.01 100.62
sw_9_scaffold_13598 3 2895 bp 48.15 4.66 100.62
Displaying items 301-350 of 21657 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.