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SW_9_UNK

In projects: SW_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 18.95 Longest contig: 153.78 Kbp Bin length: 52.88 Mbp GC content: 60.44 %
Contigs count: 21657 Features count: 72021 rRNAs count: 14 tRNAs count: 753

Genome completeness

partial RP 46 / 55 MC: 39 BSCG 39 / 51 MC: 36 ASCG 38 / 38 MC: 38
Displaying items 551-600 of 21657 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_9_scaffold_4353
Class: Halobacteria (60%)
10 6651 bp 59.07 9.40 90.71
sw_9_scaffold_640
Order: Halobacteriales (80%)
10 9391 bp 64.86 12.76 88.97
sw_9_scaffold_1483
Order: Halobacteriales (50%)
10 8383 bp 63.95 28.20 87.82
sw_9_scaffold_2285
Order: Halobacteriales (80%)
10 7076 bp 65.96 19.23 77.46
sw_9_scaffold_1921 10 4750 bp 38.67 7.26 78.91
sw_9_scaffold_406
Domain: Archaea (60%)
10 10015 bp 42.36 7.04 75.12
sw_9_scaffold_825
Class: Halobacteria (60%)
10 6790 bp 63.49 20.91 71.31
sw_9_scaffold_1046 10 5954 bp 65.74 28.00 77.29
sw_9_scaffold_2221
Order: Halobacteriales (50%)
10 8306 bp 66.01 11.17 82.24
sw_9_scaffold_2657
Class: Halobacteria (50%)
10 5462 bp 67.85 32.57 68.88
sw_9_scaffold_1692
Class: Halobacteria (70%)
10 6862 bp 53.93 11.19 86.61
sw_9_scaffold_393
Species: Salinibacter ruber (60%)
10 10169 bp 64.51 22.70 91.99
sw_9_scaffold_919
Class: Halobacteria (50%)
10 7216 bp 63.25 12.65 52.51
sw_9_scaffold_8734
Order: Halobacteriales (50%)
10 6369 bp 68.57 10.85 92.46
sw_9_scaffold_2294
Order: Natrialbales (60%)
10 6462 bp 55.73 26.66 61.84
sw_9_scaffold_943
Class: Halobacteria (70%)
10 8574 bp 66.97 12.27 85.09
sw_9_scaffold_509
Order: Halobacteriales (50%)
10 9788 bp 59.24 12.17 83.67
sw_9_scaffold_1210
Order: Natrialbales (50%)
10 9559 bp 51.19 9.51 81.79
sw_9_scaffold_1994
Order: Halobacteriales (50%)
10 6815 bp 64.37 22.00 85.36
sw_9_scaffold_2774
Order: Halobacteriales (80%)
10 7150 bp 69.10 12.22 90.84
sw_9_scaffold_343
Order: Natrialbales (50%)
10 11020 bp 57.97 11.07 78.35
sw_9_scaffold_438
Domain: Bacteria (50%)
10 9574 bp 61.32 16.92 81.38
sw_9_scaffold_1395
Class: Halobacteria (90%)
10 6242 bp 62.11 16.47 80.79
sw_9_scaffold_332
Class: Halobacteria (80%)
10 12780 bp 58.46 14.15 92.37
sw_9_scaffold_1234
Class: Halobacteria (70%)
10 8367 bp 51.97 11.00 85.87
sw_9_scaffold_1764
Class: Halobacteria (100%)
10 9430 bp 62.46 10.35 75.87
sw_9_scaffold_510
Domain: Bacteria (90%)
10 8657 bp 66.50 34.48 83.65
sw_9_scaffold_531
Class: Halobacteria (70%)
10 10104 bp 46.95 7.47 86.10
sw_9_scaffold_1488
Class: Halobacteria (80%)
10 6114 bp 64.30 10.68 88.27
sw_9_scaffold_2488
Class: Halobacteria (80%)
10 9773 bp 60.97 12.65 72.78
sw_9_scaffold_2041
Phylum: Bacteroidetes (50%)
10 8400 bp 64.07 43.13 83.79
sw_9_scaffold_3680
Genus: Halorubrum (50%)
10 7966 bp 67.79 19.55 63.81
sw_9_scaffold_6453 10 4814 bp 53.88 7.29 76.15
sw_9_scaffold_2226
Order: Halobacteriales (60%)
10 6388 bp 67.50 11.65 94.35
sw_9_scaffold_2390
Class: Halobacteria (90%)
10 11218 bp 67.89 11.37 91.19
sw_9_scaffold_2781
Order: Haloferacales (60%)
10 5334 bp 53.21 9.73 81.50
sw_9_scaffold_600
Species: Natronomonas pharaonis (50%)
10 7987 bp 70.50 34.86 90.00
sw_9_scaffold_7615
Class: Halobacteria (80%)
10 5824 bp 64.90 39.90 93.54
sw_9_scaffold_2495
Order: Halobacteriales (70%)
10 6294 bp 63.98 39.23 71.58
sw_9_scaffold_1121
Species: Halomicrobium mukohataei (50%)
10 9700 bp 57.35 25.13 82.73
sw_9_scaffold_1582
Order: Nostocales (50%)
10 9747 bp 63.94 50.38 82.98
sw_9_scaffold_1352 10 5148 bp 61.66 8.41 81.82
sw_9_scaffold_1813
Phylum: Euryarchaeota (50%)
10 8186 bp 59.03 9.49 82.02
sw_9_scaffold_1191
Class: Halobacteria (50%)
10 7000 bp 64.29 34.63 63.86
sw_9_scaffold_5128
Class: Halobacteria (60%)
10 5218 bp 63.15 8.45 91.41
sw_9_scaffold_602
Genus: Natronomonas (80%)
10 7972 bp 68.26 28.81 90.17
sw_9_scaffold_971
Domain: Bacteria (90%)
10 9665 bp 61.43 10.69 84.12
sw_9_scaffold_2502
Class: Halobacteria (50%)
10 4683 bp 63.66 9.65 80.01
sw_9_scaffold_1676
Order: Natrialbales (50%)
10 9269 bp 67.13 15.26 88.59
sw_9_scaffold_2790 10 6261 bp 43.59 8.43 77.53
Displaying items 551-600 of 21657 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.