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SW_10_UNK

In projects: SW_10  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.60 Longest contig: 134.98 Kbp Bin length: 42.41 Mbp GC content: 58.85 %
Contigs count: 17394 Features count: 56831 rRNAs count: 22 tRNAs count: 557

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Displaying items 1-50 of 17394 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_18168
Species: Natronomonas moolapensis (50%)
2 1070 bp 70.09 10.84 118.04
sw_10_scaffold_19494
Species: RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated (50%)
2 1016 bp 67.42 11.02 117.82
sw_10_scaffold_19857
Species: Salinibacter ruber (50%)
2 1001 bp 63.24 5.59 116.88
sw_10_scaffold_34200
Species: Halorhabdus utahensis (50%)
2 1101 bp 71.12 15.99 114.99
sw_10_scaffold_26532
Species: Haloferax prahovense (50%)
2 1316 bp 63.98 72.42 114.44
sw_10_scaffold_19534
Species: Halovirus HCTV-2 (50%)
2 1013 bp 65.05 8.09 112.54
sw_10_scaffold_30499
Species: Haloarcula argentinensis (50%)
2 1039 bp 67.56 11.74 112.03
sw_10_scaffold_27966
Species: Salinibacter ruber (50%)
2 1244 bp 56.43 7.56 111.90
sw_10_scaffold_33411 2 1199 bp 52.21 5.17 111.59
sw_10_scaffold_14109
Species: Halosimplex carlsbadense (50%)
2 1281 bp 65.11 14.68 111.24
sw_10_scaffold_13725
Species: Haladaptatus paucihalophilus (50%)
2 1304 bp 71.40 147.70 111.12
sw_10_scaffold_11629
Class: Halobacteria (66.67%)
3 1453 bp 65.52 84.72 111.08
sw_10_scaffold_9567
Order: Halobacteriales (66.67%)
3 1650 bp 72.18 38.73 110.91
sw_10_scaffold_18403 3 1060 bp 52.17 6.32 110.09
sw_10_scaffold_22133
Species: Thermus aquaticus (50%)
2 1499 bp 64.31 9.07 110.07
sw_10_scaffold_15295
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
2 1211 bp 34.35 4.95 108.51
sw_10_scaffold_17289
Class: Halobacteria (66.67%)
3 1109 bp 43.64 4.96 108.21
sw_10_scaffold_10228
Species: Halobacterium sp. DL1 (50%)
4 1581 bp 64.26 10.37 108.16
sw_10_scaffold_22635
Domain: Bacteria (50%)
4 1457 bp 44.75 6.79 107.69
sw_10_scaffold_26777 4 1437 bp 55.25 6.19 107.52
sw_10_scaffold_30873
Species: Natronomonas moolapensis (50%)
2 1210 bp 63.47 18.02 107.36
sw_10_scaffold_11555 3 1459 bp 56.00 8.70 107.33
sw_10_scaffold_29108
Class: Halobacteria (66.67%)
3 1170 bp 70.77 33.42 106.67
sw_10_scaffold_23904
Species: Salinibacter ruber (50%)
2 1221 bp 61.02 10.40 106.63
sw_10_scaffold_10846 3 2661 bp 53.63 8.49 106.31
sw_10_scaffold_33469
Species: Halosimplex carlsbadense (50%)
2 1068 bp 69.19 18.54 105.62
sw_10_scaffold_18342
Order: Haloferacales (66.67%)
3 1063 bp 61.81 6.30 105.55
sw_10_scaffold_25149
Species: Natrialba aegyptia (50%)
2 1331 bp 66.79 15.85 105.49
sw_10_scaffold_36703
Species: Halanaeroarchaeum sulfurireducens (50%)
2 1050 bp 61.14 37.33 105.43
sw_10_scaffold_14725
Species: Halococcus salifodinae (66.67%)
3 2160 bp 71.39 21.20 105.42
sw_10_scaffold_35683
Species: Leptothrix cholodnii (50%)
2 1130 bp 73.45 10.27 105.40
sw_10_scaffold_10873 3 2324 bp 72.50 24.61 105.34
sw_10_scaffold_17924
Species: Metarhizium majus (50%)
2 1080 bp 55.28 5.00 105.28
sw_10_scaffold_27353
Species: Halogeometricum pallidum (50%)
2 1137 bp 67.63 12.05 105.28
sw_10_scaffold_32520
Species: RBG_19FT_COMBO_Planctomycetes_48_8_curated (50%)
2 1135 bp 66.70 7.31 105.20
sw_10_scaffold_19275 3 1024 bp 52.05 7.23 105.18
sw_10_scaffold_41331
Domain: Bacteria (66.67%)
3 1110 bp 53.69 6.22 105.14
sw_10_scaffold_33641 2 1171 bp 43.21 4.95 105.04
sw_10_scaffold_37037
Species: Rhodothermus marinus (50%)
2 1094 bp 69.93 8.14 105.03
sw_10_scaffold_12032
Species: Salinibacter ruber (50%)
2 1421 bp 61.51 31.39 104.93
sw_10_scaffold_15903
Species: Salinibacter ruber (50%)
2 1178 bp 65.45 11.71 104.92
sw_10_scaffold_17479
Species: Acanthocystis turfacea Chlorella virus GM0701.1 (50%)
2 1101 bp 22.52 4.27 104.91
sw_10_scaffold_15406 2 1204 bp 58.14 6.23 104.90
sw_10_scaffold_32154
Species: Haloarcula marismortui (50%)
2 1213 bp 64.63 9.73 104.86
sw_10_scaffold_18575 3 1053 bp 39.32 3.99 104.84
sw_10_scaffold_18369
Species: Haloferax larsenii (100%)
2 1062 bp 57.82 6.59 104.80
sw_10_scaffold_36398
Species: halophilic archaeon J07HX64 (50%)
2 1017 bp 69.42 9.54 104.72
sw_10_scaffold_35052 4 1138 bp 60.63 6.24 104.66
sw_10_scaffold_17062
Species: Candidatus Halobonum tyrrellensis (50%)
4 1957 bp 60.25 99.80 104.55
sw_10_scaffold_34028
Species: Rhodothermus marinus (50%)
2 1174 bp 63.71 8.77 104.51
Displaying items 1-50 of 17394 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.