ggKbase | organisms

SW_10_UNK

In projects: SW_10 | diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.60 Longest contig: 134.98 Kbp Bin length: 42.41 Mbp GC content: 58.85 %

Contigs count: 17394 Features count: 56831 rRNAs count: 22 tRNAs count: 557

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37

Displaying items 1-50 of 17394 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
sw_10_scaffold_18168 Species: Natronomonas moolapensis (50%)	2	1070 bp	70.09	10.84	118.04
sw_10_scaffold_19494 Species: RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated (50%)	2	1016 bp	67.42	11.02	117.82
sw_10_scaffold_19857 Species: Salinibacter ruber (50%)	2	1001 bp	63.24	5.59	116.88
sw_10_scaffold_34200 Species: Halorhabdus utahensis (50%)	2	1101 bp	71.12	15.99	114.99
sw_10_scaffold_26532 Species: Haloferax prahovense (50%)	2	1316 bp	63.98	72.42	114.44
sw_10_scaffold_19534 Species: Halovirus HCTV-2 (50%)	2	1013 bp	65.05	8.09	112.54
sw_10_scaffold_30499 Species: Haloarcula argentinensis (50%)	2	1039 bp	67.56	11.74	112.03
sw_10_scaffold_27966 Species: Salinibacter ruber (50%)	2	1244 bp	56.43	7.56	111.90
sw_10_scaffold_33411	2	1199 bp	52.21	5.17	111.59
sw_10_scaffold_14109 Species: Halosimplex carlsbadense (50%)	2	1281 bp	65.11	14.68	111.24
sw_10_scaffold_13725 Species: Haladaptatus paucihalophilus (50%)	2	1304 bp	71.40	147.70	111.12
sw_10_scaffold_11629 Class: Halobacteria (66.67%)	3	1453 bp	65.52	84.72	111.08
sw_10_scaffold_9567 Order: Halobacteriales (66.67%)	3	1650 bp	72.18	38.73	110.91
sw_10_scaffold_18403	3	1060 bp	52.17	6.32	110.09
sw_10_scaffold_22133 Species: Thermus aquaticus (50%)	2	1499 bp	64.31	9.07	110.07
sw_10_scaffold_15295 Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)	2	1211 bp	34.35	4.95	108.51
sw_10_scaffold_17289 Class: Halobacteria (66.67%)	3	1109 bp	43.64	4.96	108.21
sw_10_scaffold_10228 Species: Halobacterium sp. DL1 (50%)	4	1581 bp	64.26	10.37	108.16
sw_10_scaffold_22635 Domain: Bacteria (50%)	4	1457 bp	44.75	6.79	107.69
sw_10_scaffold_26777	4	1437 bp	55.25	6.19	107.52
sw_10_scaffold_30873 Species: Natronomonas moolapensis (50%)	2	1210 bp	63.47	18.02	107.36
sw_10_scaffold_11555	3	1459 bp	56.00	8.70	107.33
sw_10_scaffold_29108 Class: Halobacteria (66.67%)	3	1170 bp	70.77	33.42	106.67
sw_10_scaffold_23904 Species: Salinibacter ruber (50%)	2	1221 bp	61.02	10.40	106.63
sw_10_scaffold_10846	3	2661 bp	53.63	8.49	106.31
sw_10_scaffold_33469 Species: Halosimplex carlsbadense (50%)	2	1068 bp	69.19	18.54	105.62
sw_10_scaffold_18342 Order: Haloferacales (66.67%)	3	1063 bp	61.81	6.30	105.55
sw_10_scaffold_25149 Species: Natrialba aegyptia (50%)	2	1331 bp	66.79	15.85	105.49
sw_10_scaffold_36703 Species: Halanaeroarchaeum sulfurireducens (50%)	2	1050 bp	61.14	37.33	105.43
sw_10_scaffold_14725 Species: Halococcus salifodinae (66.67%)	3	2160 bp	71.39	21.20	105.42
sw_10_scaffold_35683 Species: Leptothrix cholodnii (50%)	2	1130 bp	73.45	10.27	105.40
sw_10_scaffold_10873	3	2324 bp	72.50	24.61	105.34
sw_10_scaffold_17924 Species: Metarhizium majus (50%)	2	1080 bp	55.28	5.00	105.28
sw_10_scaffold_27353 Species: Halogeometricum pallidum (50%)	2	1137 bp	67.63	12.05	105.28
sw_10_scaffold_32520 Species: RBG_19FT_COMBO_Planctomycetes_48_8_curated (50%)	2	1135 bp	66.70	7.31	105.20
sw_10_scaffold_19275	3	1024 bp	52.05	7.23	105.18
sw_10_scaffold_41331 Domain: Bacteria (66.67%)	3	1110 bp	53.69	6.22	105.14
sw_10_scaffold_33641	2	1171 bp	43.21	4.95	105.04
sw_10_scaffold_37037 Species: Rhodothermus marinus (50%)	2	1094 bp	69.93	8.14	105.03
sw_10_scaffold_12032 Species: Salinibacter ruber (50%)	2	1421 bp	61.51	31.39	104.93
sw_10_scaffold_15903 Species: Salinibacter ruber (50%)	2	1178 bp	65.45	11.71	104.92
sw_10_scaffold_17479 Species: Acanthocystis turfacea Chlorella virus GM0701.1 (50%)	2	1101 bp	22.52	4.27	104.91
sw_10_scaffold_15406	2	1204 bp	58.14	6.23	104.90
sw_10_scaffold_32154 Species: Haloarcula marismortui (50%)	2	1213 bp	64.63	9.73	104.86
sw_10_scaffold_18575	3	1053 bp	39.32	3.99	104.84
sw_10_scaffold_18369 Species: Haloferax larsenii (100%)	2	1062 bp	57.82	6.59	104.80
sw_10_scaffold_36398 Species: halophilic archaeon J07HX64 (50%)	2	1017 bp	69.42	9.54	104.72
sw_10_scaffold_35052	4	1138 bp	60.63	6.24	104.66
sw_10_scaffold_17062 Species: Candidatus Halobonum tyrrellensis (50%)	4	1957 bp	60.25	99.80	104.55
sw_10_scaffold_34028 Species: Rhodothermus marinus (50%)	2	1174 bp	63.71	8.77	104.51

Displaying items 1-50 of 17394 in total

SW_10_UNK

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

SW_10_UNK

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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