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SW_10_UNK

In projects: SW_10  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.60 Longest contig: 134.98 Kbp Bin length: 42.41 Mbp GC content: 58.85 %
Contigs count: 17394 Features count: 56831 rRNAs count: 22 tRNAs count: 557

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Displaying items 15951-16000 of 17394 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_17016
Species: Methanohalobium evestigatum (100%)
1 1122 bp 47.06 5.35 99.73
sw_10_scaffold_17029 3 1756 bp 34.74 5.35 53.30
sw_10_scaffold_4066
Order: Natrialbales (60%)
5 2824 bp 39.06 5.35 97.84
sw_10_scaffold_11553 3 1459 bp 41.47 5.35 100.34
sw_10_scaffold_13632
Species: Oryctolagus cuniculus (100%)
1 1309 bp 52.41 5.35 93.05
sw_10_scaffold_18715
Species: RBG_16_Planctomycetes_41_13_curated (100%)
1 1047 bp 48.14 5.35 78.80
sw_10_scaffold_18723 1 1046 bp 56.69 5.35 65.68
sw_10_scaffold_20938 3 1496 bp 41.18 5.35 77.21
sw_10_scaffold_18734
Species: RBG_13_Woesearchaeota_36_6_curated (50%)
2 1046 bp 52.49 5.35 100.10
sw_10_scaffold_1874 8 4510 bp 53.17 5.34 70.78
sw_10_scaffold_16255
Species: Haloarcula californiae (50%)
2 1160 bp 56.29 5.34 55.34
sw_10_scaffold_11881
Species: marine sediment metagenome (50%)
2 3034 bp 35.99 5.34 47.76
sw_10_scaffold_9935
Species: BJP_IG2103_Bacteroidetes_41_9 (50%)
2 1609 bp 36.86 5.34 98.45
sw_10_scaffold_15878
Species: Halorubrum lipolyticum (100%)
1 1180 bp 57.97 5.34 99.66
sw_10_scaffold_13802 3 2191 bp 43.36 5.34 96.12
sw_10_scaffold_9072 1 1705 bp 38.59 5.34 17.24
sw_10_scaffold_8397
Species: Bacteroides sp. HPS0048 (50%)
2 1799 bp 37.35 5.34 93.72
sw_10_scaffold_16570 1 1143 bp 53.72 5.34 59.06
sw_10_scaffold_11524
Species: RBG_13_Pacearchaeota_36_9_curated (50%)
2 1461 bp 54.21 5.34 100.21
sw_10_scaffold_19141 2 1030 bp 52.62 5.34 82.43
sw_10_scaffold_18661
Species: Natronococcus jeotgali (50%)
2 1049 bp 56.34 5.34 90.09
sw_10_scaffold_13627
Domain: Viridiplantae (66.67%)
3 1310 bp 52.90 5.34 88.63
sw_10_scaffold_25918
Species: GWF2_Bacteroidetes_41_31_curated (50%)
2 1741 bp 35.44 5.34 28.78
sw_10_scaffold_10872
Species: Aphanocapsa montana (50%)
2 1518 bp 42.09 5.34 89.13
sw_10_scaffold_17807
Species: Halovivax asiaticus (100%)
1 1086 bp 49.72 5.34 88.12
sw_10_scaffold_17369 3 1105 bp 62.44 5.34 97.47
sw_10_scaffold_10669 3 1537 bp 56.34 5.34 84.71
sw_10_scaffold_15532
Species: Haloterrigena salina (100%)
1 1198 bp 63.27 5.34 96.91
sw_10_scaffold_12534
Species: Natronorubrum sulfidifaciens (50%)
2 1385 bp 53.57 5.34 81.44
sw_10_scaffold_5966
Domain: Archaea (50%)
4 2231 bp 43.93 5.33 82.83
sw_10_scaffold_6913
Domain: Viridiplantae (66.67%)
3 3674 bp 54.71 5.33 77.00
sw_10_scaffold_5782 4 2269 bp 24.72 5.33 79.86
sw_10_scaffold_16514 3 1145 bp 47.77 5.33 97.21
sw_10_scaffold_1262
Domain: Bacteria (83.33%)
6 5811 bp 40.23 5.33 85.39
sw_10_scaffold_6040
Phylum: Euryarchaeota (50%)
4 2212 bp 41.82 5.33 99.28
sw_10_scaffold_7195 5 2515 bp 26.00 5.33 94.47
sw_10_scaffold_16529 1 1145 bp 53.10 5.33 44.28
sw_10_scaffold_9053 1 1708 bp 50.94 5.33 99.77
sw_10_scaffold_3812
Phylum: Bacteroidetes (75%)
4 2945 bp 37.42 5.33 96.57
sw_10_scaffold_18627
Species: Halostagnicola sp. A56 (50%)
2 1051 bp 43.20 5.33 99.62
sw_10_scaffold_19109 1 1031 bp 53.83 5.33 99.81
sw_10_scaffold_17750
Species: Selaginella moellendorffii (50%)
2 1089 bp 51.70 5.33 85.12
sw_10_scaffold_17768 2 1088 bp 39.52 5.33 35.02
sw_10_scaffold_8635
Species: Triticum aestivum (50%)
2 1765 bp 55.41 5.33 95.52
sw_10_scaffold_6564
Domain: Bacteria (66.67%)
3 2100 bp 38.33 5.33 95.86
sw_10_scaffold_13869 3 1294 bp 33.85 5.33 86.71
sw_10_scaffold_6842 4 2046 bp 52.69 5.33 65.25
sw_10_scaffold_14813 2 1239 bp 56.42 5.33 93.46
sw_10_scaffold_27291
Species: Halorubrum tebenquichense (66.67%)
3 1482 bp 54.66 5.33 69.23
sw_10_scaffold_8746
Species: Candidatus Nanosalina sp. J07AB43 (100%)
2 1749 bp 47.00 5.32 94.51
Displaying items 15951-16000 of 17394 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.