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SW_10_UNK

In projects: SW_10  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.60 Longest contig: 134.98 Kbp Bin length: 42.41 Mbp GC content: 58.85 %
Contigs count: 17394 Features count: 56831 rRNAs count: 22 tRNAs count: 557

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Displaying items 16701-16750 of 17394 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_18668
Species: R_OD1_Kaiserbacteria_56_24 (50%)
2 1049 bp 38.89 4.77 45.47
sw_10_scaffold_8665
Species: Haloquadratum walsbyi (50%)
2 1760 bp 39.72 4.77 81.31
sw_10_scaffold_18692 1 1048 bp 22.23 4.77 99.90
sw_10_scaffold_12523 1 1385 bp 55.88 4.77 39.86
sw_10_scaffold_11409 3 1470 bp 40.07 4.76 51.63
sw_10_scaffold_17681
Species: Haloterrigena turkmenica (100%)
1 1092 bp 43.77 4.76 88.46
sw_10_scaffold_17687
Species: halophilic archaeon DL31 (50%)
2 1092 bp 52.75 4.76 90.11
sw_10_scaffold_9275 2 1680 bp 24.23 4.76 97.86
sw_10_scaffold_4240
Species: Aphanomyces astaci (50%)
2 2750 bp 58.76 4.76 86.51
sw_10_scaffold_14085
Species: Natronorubrum sulfidifaciens (50%)
2 1282 bp 52.57 4.76 93.14
sw_10_scaffold_9835
Domain: Archaea (66.67%)
3 1619 bp 41.01 4.76 84.13
sw_10_scaffold_17830
Species: Vitis vinifera (50%)
2 2163 bp 53.81 4.76 81.69
sw_10_scaffold_6408 4 3718 bp 54.84 4.76 76.09
sw_10_scaffold_19678
Species: Methanosarcina barkeri (50%)
2 1008 bp 52.38 4.76 100.00
sw_10_scaffold_16690
Species: Methanococcoides methylutens (50%)
2 1136 bp 51.41 4.75 100.88
sw_10_scaffold_17154 3 1116 bp 53.94 4.75 93.82
sw_10_scaffold_13727 2 1304 bp 59.43 4.75 66.26
sw_10_scaffold_14423
Species: GWC2_Ignavibacteria_rel_36_12_curated (50%)
2 1262 bp 39.46 4.75 65.85
sw_10_scaffold_15123 1 1221 bp 60.28 4.75 100.00
sw_10_scaffold_27641 2 1474 bp 58.48 4.75 69.20
sw_10_scaffold_18104
Species: Winogradskyella sp. PG-2 (50%)
2 1073 bp 59.93 4.75 47.25
sw_10_scaffold_18606
Species: Glycine max (100%)
1 1052 bp 54.18 4.75 72.43
sw_10_scaffold_30482 3 1348 bp 38.20 4.75 76.11
sw_10_scaffold_19116
Species: RIFOXYC2_FULL_RIF_IGX_35_21_curated (100%)
1 1031 bp 42.19 4.75 89.91
sw_10_scaffold_19589
Species: Pontibacter korlensis (50%)
2 1011 bp 37.49 4.75 51.34
sw_10_scaffold_15483
Species: Halococcus thailandensis (50%)
2 1201 bp 40.55 4.75 100.42
sw_10_scaffold_12467 3 1389 bp 42.69 4.75 68.03
sw_10_scaffold_10909
Domain: Viruses (50%)
4 1516 bp 52.44 4.75 101.91
sw_10_scaffold_9638
Domain: Viridiplantae (66.67%)
3 1643 bp 55.02 4.75 71.94
sw_10_scaffold_11861
Class: rosids (66.67%)
3 1435 bp 54.98 4.74 84.88
sw_10_scaffold_9213
Species: Schleiferia thermophila (50%)
2 1687 bp 37.58 4.74 69.71
sw_10_scaffold_7863 2 1877 bp 23.97 4.74 73.84
sw_10_scaffold_19078
Species: RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated (50%)
2 1033 bp 52.27 4.74 97.87
sw_10_scaffold_17569
Species: archaeon GW2011_AR17 (50%)
2 1098 bp 46.81 4.74 76.23
sw_10_scaffold_16232
Species: Halococcus salifodinae (100%)
1 1161 bp 53.57 4.74 53.23
sw_10_scaffold_18996
Species: GWA2_TM6_36_9 (50%)
2 1036 bp 27.32 4.73 94.11
sw_10_scaffold_25363 3 1480 bp 42.97 4.73 52.09
sw_10_scaffold_15365 3 1206 bp 55.64 4.73 67.66
sw_10_scaffold_19515 1 1015 bp 39.01 4.73 51.72
sw_10_scaffold_6819
Species: Naegleria gruberi (66.67%)
3 2051 bp 24.28 4.73 96.68
sw_10_scaffold_10406
Species: Haloarcula californiae (100%)
1 1564 bp 43.93 4.73 99.94
sw_10_scaffold_7288 6 1966 bp 49.34 4.73 85.91
sw_10_scaffold_18949
Species: Rhodothermus marinus (50%)
2 1037 bp 63.26 4.73 52.65
sw_10_scaffold_27343
Species: Halorhabdus tiamatea (50%)
2 1585 bp 43.09 4.73 53.75
sw_10_scaffold_30015 2 1972 bp 51.62 4.72 47.77
sw_10_scaffold_12373
Species: Halothece sp. PCC 7418 (66.67%)
3 1397 bp 35.15 4.72 71.08
sw_10_scaffold_16972 1 1124 bp 44.31 4.72 39.50
sw_10_scaffold_16518
Species: Bacteroides stercoris (50%)
2 1145 bp 33.36 4.72 99.83
sw_10_scaffold_16527
Species: Scytonema millei (100%)
1 1145 bp 54.93 4.72 99.83
sw_10_scaffold_17017 2 1122 bp 46.70 4.72 21.66
Displaying items 16701-16750 of 17394 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.