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SW_11_UNK

In projects: SW_11  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 18.10 Longest contig: 206.16 Kbp Bin length: 36.83 Mbp GC content: 60.58 %
Contigs count: 13823 Features count: 48125 rRNAs count: 12 tRNAs count: 554

Genome completeness

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Displaying items 201-250 of 13823 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_11_scaffold_16167
Species: Saccharophagus degradans (50%)
2 1002 bp 68.96 8.48 100.90
sw_11_scaffold_15756
Species: Halanaeroarchaeum sulfurireducens (50%)
2 1020 bp 57.84 8.04 100.88
sw_11_scaffold_4351
Species: Microspora stagnorum (50%)
2 2531 bp 40.30 33.82 100.87
sw_11_scaffold_9268
Species: Caldanaerobacter subterraneus (50%)
2 1508 bp 46.49 4.91 100.86
sw_11_scaffold_10234
Species: gamma proteobacterium HTCC5015 (66.67%)
3 1395 bp 69.03 7.53 100.86
sw_11_scaffold_10239
Phylum: Proteobacteria (66.67%)
3 1395 bp 59.43 6.45 100.86
sw_11_scaffold_1903
Domain: Bacteria (66.67%)
3 4322 bp 51.90 6.76 100.86
sw_11_scaffold_6697
Phylum: Bacteroidetes (66.67%)
3 2975 bp 47.83 6.55 100.84
sw_11_scaffold_1958
Order: Haloferacales (60%)
5 6114 bp 60.06 19.79 100.83
sw_11_scaffold_17013
Species: Haloarcula vallismortis (66.67%)
3 1324 bp 60.65 17.15 100.83
sw_11_scaffold_5948
Species: Natronococcus amylolyticus (50%)
2 2050 bp 68.15 10.63 100.83
sw_11_scaffold_5465 3 2175 bp 47.40 7.54 100.83
sw_11_scaffold_8715
Species: Salinibacter ruber (100%)
3 1571 bp 67.41 29.85 100.83
sw_11_scaffold_14351
Species: Klebsiella pneumoniae (50%)
2 1092 bp 69.32 7.97 100.82
sw_11_scaffold_6391 4 1952 bp 57.27 6.40 100.82
sw_11_scaffold_7639
Genus: Halococcus (50%)
4 1726 bp 68.89 9.21 100.81
sw_11_scaffold_9427
Order: Halobacteriales (100%)
3 1488 bp 68.35 11.63 100.81
sw_11_scaffold_8364
Genus: Natronomonas (60%)
5 1616 bp 65.90 41.89 100.80
sw_11_scaffold_16200
Phylum: Bacteroidetes (100%)
3 1000 bp 46.70 5.70 100.80
sw_11_scaffold_6682
Order: Halobacteriales (66.67%)
3 1896 bp 60.71 9.18 100.79
sw_11_scaffold_10480
Species: RBG_13_RIF_OD1_08_41_18_curated (50%)
2 3176 bp 62.81 15.11 100.79
sw_11_scaffold_13455
Species: Environmental Halophage eHP-31 (50%)
2 1146 bp 41.62 4.54 100.79
sw_11_scaffold_15587
Species: Nematostella vectensis (50%)
2 1027 bp 58.52 7.40 100.78
sw_11_scaffold_7001
Species: Natronomonas pharaonis (50%)
2 1831 bp 69.63 35.94 100.76
sw_11_scaffold_12957 2 1179 bp 40.03 5.77 100.76
sw_11_scaffold_25501
Species: Haloarcula japonica (66.67%)
3 1191 bp 53.82 11.42 100.76
sw_11_scaffold_6860
Species: CSP1_3_Armatimonadetes (50%)
2 1861 bp 54.06 4.84 100.75
sw_11_scaffold_1976
Species: marine sediment metagenome (75%)
4 4235 bp 48.31 6.54 100.73
sw_11_scaffold_14240
Species: Geofilum rubicundum (50%)
2 1099 bp 42.86 8.19 100.73
sw_11_scaffold_11400 2 1948 bp 49.08 6.93 100.72
sw_11_scaffold_28681
Order: Halobacteriales (100%)
4 1278 bp 66.51 24.49 100.70
sw_11_scaffold_16182
Genus: Halorubrum (66.67%)
3 1001 bp 62.74 17.68 100.70
sw_11_scaffold_9895
Species: Dactylococcopsis salina (100%)
2 1433 bp 44.31 19.47 100.70
sw_11_scaffold_6790
Order: Halobacteriales (66.67%)
3 1874 bp 71.08 26.57 100.69
sw_11_scaffold_15975
Species: Haloferax sulfurifontis (50%)
2 1010 bp 56.93 7.13 100.69
sw_11_scaffold_15625
Order: Halobacteriales (66.67%)
3 1025 bp 68.78 22.54 100.68
sw_11_scaffold_11320
Genus: Halorubrum (50%)
4 1761 bp 68.09 13.23 100.68
sw_11_scaffold_4405
Species: halophilic archaeon J07HX64 (66.67%)
3 2512 bp 64.49 12.38 100.68
sw_11_scaffold_12872
Species: Haloquadratum walsbyi (100%)
2 1186 bp 50.00 12.23 100.68
sw_11_scaffold_12761
Species: Natronomonas pharaonis (50%)
2 1192 bp 68.79 58.72 100.67
sw_11_scaffold_15207
Species: Natronomonas pharaonis (50%)
2 1046 bp 61.76 16.44 100.67
sw_11_scaffold_12317 3 1219 bp 52.83 9.35 100.66
sw_11_scaffold_4560 6 2450 bp 64.78 12.73 100.65
sw_11_scaffold_6878
Species: Halothece sp. PCC 7418 (100%)
3 1857 bp 45.23 7.59 100.65
sw_11_scaffold_13416
Order: Halobacteriales (100%)
3 1705 bp 60.76 7.51 100.65
sw_11_scaffold_8767
Species: Natronobacterium gregoryi (50%)
2 1565 bp 56.68 7.22 100.64
sw_11_scaffold_14284
Species: Haloferax volcanii (66.67%)
3 1097 bp 56.15 5.47 100.64
sw_11_scaffold_9481
Species: Haladaptatus paucihalophilus (66.67%)
3 1929 bp 73.98 35.82 100.62
sw_11_scaffold_8362
Order: Halobacteriales (100%)
3 1616 bp 70.85 11.20 100.62
sw_11_scaffold_13707
Species: Halogranum salarium (50%)
2 1133 bp 70.61 8.91 100.62
Displaying items 201-250 of 13823 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.