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sw_12_scaffold_16_3

Organism: SW_12_UNK

megabin RP 51 / 55 MC: 40 BSCG 46 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: comp(2005..2580)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG02_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 189.0
  • Bit_score: 144
  • Evalue 8.00e-32
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 171.0
  • Bit_score: 150
  • Evalue 4.10e-34
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AHG89921.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 171.0
  • Bit_score: 150
  • Evalue 2.00e-33

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 576
ATGCCGAACGCGTCCCAAAAGCAGCGGGACCGTCAGTGGGCCGACCGCATTCGGGCGGGCGACCGCGAGGCCTTCGAGAGACTCTTCCGCGCGTACGCCGATGCCCTCTGTACCTTTGCGGCGCAGCACGTGGACGACGAAGCCCTCGCGGAGGACCTTGTCCAGGACGTGTTTTGTGACCTCTGGGATCGGCGAGAAGAGTGGCGCCCGCAAGGAAGCGTAAAGGCATACTTGTTTCGCGCCGTTCGCAACACGTCGCTCGACCACCTGGAGCATCGCCGCGTCGTGCAGGAGTGGGAGGATGAAGAGAAGCGCCGGAACTCTTCCCCGGAGCCGAGAAGGGGGCCGGCGGATGCCCTCCAGCACCGGGAGTTGAAGCGGGCCATGCAGGAGGCCGTGGAGGAGCTGCCGGAGCGGCGCCGGCTCGTCTACCGCATGGCCCGCCGTCACGACATGAGCTACGCGGAGATTGCCTCGGCCCTGGACATTGCGCCGAAGACCGTGGAAAACCAGATGGGCCGCGCCCTGAAGGCGCTCCGGGACCGTCTTGCGAAGTATGCTGCATTTCTTCAGTAG
PROTEIN sequence
Length: 192
MPNASQKQRDRQWADRIRAGDREAFERLFRAYADALCTFAAQHVDDEALAEDLVQDVFCDLWDRREEWRPQGSVKAYLFRAVRNTSLDHLEHRRVVQEWEDEEKRRNSSPEPRRGPADALQHRELKRAMQEAVEELPERRRLVYRMARRHDMSYAEIASALDIAPKTVENQMGRALKALRDRLAKYAAFLQ*