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SW_12_UNK

In projects: SW_12  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.14 Longest contig: 94.24 Kbp Bin length: 46.65 Mbp GC content: 61.73 %
Contigs count: 17634 Features count: 60909 rRNAs count: 18 tRNAs count: 469

Genome completeness

megabin RP 51 / 55 MC: 40 BSCG 46 / 51 MC: 37 ASCG 38 / 38 MC: 38
Displaying items 201-250 of 17634 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_12_scaffold_17100
Species: Haloferax mucosum (50%)
2 1137 bp 68.60 21.46 100.79
sw_12_scaffold_19720
Species: Halococcus saccharolyticus (50%)
2 1015 bp 53.79 5.22 100.79
sw_12_scaffold_19667
Species: Halanaeroarchaeum sulfurireducens (50%)
2 1018 bp 60.02 9.53 100.79
sw_12_scaffold_13101
Species: Halomicrobium mukohataei (50%)
2 1402 bp 73.11 13.77 100.79
sw_12_scaffold_10536
Species: Halorubrum saccharovorum (50%)
2 1658 bp 55.19 4.83 100.78
sw_12_scaffold_10386
Genus: Natronomonas (50%)
6 1676 bp 68.20 57.64 100.78
sw_12_scaffold_19305
Species: R_Deltaproteobacteria_44_16 (50%)
2 1033 bp 60.60 19.46 100.77
sw_12_scaffold_19256
Species: Natronomonas pharaonis (100%)
3 1036 bp 69.02 46.43 100.77
sw_12_scaffold_18630
Species: Salinarchaeum sp. Harcht-Bsk1 (66.67%)
3 1566 bp 70.18 9.20 100.77
sw_12_scaffold_19008
Species: Natronomonas pharaonis (100%)
3 1045 bp 73.78 15.79 100.77
sw_12_scaffold_12362
Genus: Haloarcula (100%)
3 1465 bp 66.21 15.09 100.75
sw_12_scaffold_10820
Class: Halobacteria (66.67%)
3 1626 bp 75.83 18.45 100.74
sw_12_scaffold_15592
Species: Natronomonas pharaonis (50%)
2 1224 bp 73.20 14.95 100.74
sw_12_scaffold_18083
Species: Haloferax alexandrinus (50%)
2 1090 bp 48.99 4.95 100.73
sw_12_scaffold_8623
Species: Halomicrobium mukohataei (50%)
4 2636 bp 72.61 22.38 100.72
sw_12_scaffold_5793 4 2505 bp 39.60 4.55 100.72
sw_12_scaffold_16959
Species: Halogeometricum pallidum (50%)
2 1144 bp 69.32 28.67 100.70
sw_12_scaffold_35136
Species: Halococcus salifodinae (100%)
3 1007 bp 69.02 22.64 100.70
sw_12_scaffold_19840
Species: Natronomonas moolapensis (66.67%)
3 1010 bp 68.91 31.39 100.69
sw_12_scaffold_19787
Species: Halococcus salifodinae (100%)
3 1013 bp 72.46 25.57 100.69
sw_12_scaffold_19613
Species: Halorubrum saccharovorum (50%)
2 1019 bp 74.48 9.72 100.69
sw_12_scaffold_9806
Genus: Halococcus (66.67%)
3 1749 bp 49.23 5.37 100.69
sw_12_scaffold_13969
Species: Halosimplex carlsbadense (100%)
2 1332 bp 69.52 13.21 100.68
sw_12_scaffold_16121
Species: Natronomonas moolapensis (50%)
2 1192 bp 62.50 10.15 100.67
sw_12_scaffold_13837
Species: Haladaptatus paucihalophilus (50%)
2 1341 bp 70.40 9.62 100.67
sw_12_scaffold_17136 7 3436 bp 65.69 10.77 100.67
sw_12_scaffold_21832
Order: Haloferacales (66.67%)
3 1496 bp 46.46 5.48 100.67
sw_12_scaffold_18731
Order: Natrialbales (66.67%)
3 1058 bp 58.51 27.32 100.66
sw_12_scaffold_9126
Species: Thermoanaerobacter wiegelii (50%)
2 1839 bp 59.49 5.22 100.65
sw_12_scaffold_18244
Species: Halococcus morrhuae (100%)
2 1082 bp 61.83 8.96 100.65
sw_12_scaffold_17798 2 1103 bp 39.80 5.35 100.64
sw_12_scaffold_21189
Species: Halogranum salarium (50%)
2 1735 bp 65.19 18.79 100.63
sw_12_scaffold_14973
Species: Halarchaeum acidiphilum (50%)
2 1264 bp 67.33 25.79 100.63
sw_12_scaffold_17434
Species: Natronomonas moolapensis (50%)
2 1121 bp 69.94 31.58 100.62
sw_12_scaffold_14228
Order: Halobacteriales (66.67%)
3 1312 bp 72.56 25.08 100.61
sw_12_scaffold_22113 5 1485 bp 61.62 11.18 100.61
sw_12_scaffold_16673
Species: Halorhabdus utahensis (100%)
3 1160 bp 62.33 16.64 100.60
sw_12_scaffold_10530
Species: Haloferax elongans (66.67%)
3 1658 bp 59.35 11.58 100.60
sw_12_scaffold_16622
Species: Halosimplex carlsbadense (100%)
2 1163 bp 71.20 8.43 100.60
sw_12_scaffold_21033
Species: Haloarcula japonica (50%)
2 1834 bp 68.38 27.32 100.60
sw_12_scaffold_11747
Order: Halobacteriales (66.67%)
3 1527 bp 61.49 11.20 100.59
sw_12_scaffold_19534
Species: Halorhabdus utahensis (50%)
2 1023 bp 56.11 11.93 100.59
sw_12_scaffold_10817
Order: Halobacteriales (50%)
4 2398 bp 69.31 26.52 100.58
sw_12_scaffold_29369
Species: Halococcus saccharolyticus (50%)
2 1199 bp 68.39 32.86 100.58
sw_12_scaffold_19388
Class: Halobacteria (66.67%)
3 1029 bp 77.36 26.92 100.58
sw_12_scaffold_15908
Class: Halobacteria (66.67%)
3 1205 bp 70.04 12.86 100.58
sw_12_scaffold_19275
Species: Halorubrum sp. AJ67 (50%)
2 1035 bp 59.61 6.96 100.58
sw_12_scaffold_13026
Species: Natronomonas moolapensis (50%)
2 1408 bp 71.80 33.10 100.57
sw_12_scaffold_13027
Species: Bacillus thuringiensis (50%)
2 1408 bp 49.15 7.03 100.57
sw_12_scaffold_12958
Species: Halococcus saccharolyticus (50%)
2 1414 bp 71.85 27.16 100.57
Displaying items 201-250 of 17634 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.