| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| 30S ribosomal protein S1 | similarity |
KEGG
DB: KEGG |
42.0 | 367.0 | 285 | 2.30e-74 | sox:TM7x_00695 |
| RNA binding S1 domain protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B22D3 (db=UNIREF evalue=3.0e-63 bit_score=246.0 identity=40.63 coverage=80.1470588235294) | similarity |
UNIREF
DB: UNIREF |
40.63 | 80.15 | 246 | 3.00e-63 | sox:TM7x_00695 |
| seg (db=Seg db_id=seg from=221 to=232) | iprscan |
interpro
DB: Seg |
null | null | null | null | sox:TM7x_00695 |
| seg (db=Seg db_id=seg from=94 to=110) | iprscan |
interpro
DB: Seg |
null | null | null | null | sox:TM7x_00695 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=237 to=331 evalue=5.8e-21 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.80e-21 | sox:TM7x_00695 |
| no description (db=HMMSmart db_id=SM00316 from=238 to=318 evalue=3.6e-20) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 3.60e-20 | sox:TM7x_00695 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=313 to=402 evalue=5.3e-19 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.30e-19 | sox:TM7x_00695 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=272 to=293 evalue=1.9e-16 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.90e-16 | sox:TM7x_00695 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=348 to=367 evalue=1.9e-16 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.90e-16 | sox:TM7x_00695 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=61 to=79 evalue=1.9e-16 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.90e-16 | sox:TM7x_00695 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=388 to=406 evalue=1.9e-16 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.90e-16 | sox:TM7x_00695 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=235 to=320 evalue=5.1e-15 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 5.10e-15 | sox:TM7x_00695 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=42 to=153 evalue=1.9e-13 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.90e-13 | sox:TM7x_00695 |
| TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=234 to=370 evalue=2.9e-12) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 2.90e-12 | sox:TM7x_00695 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=131 to=224 evalue=5.2e-12 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.20e-12 | sox:TM7x_00695 |
| no description (db=HMMSmart db_id=SM00316 from=333 to=405 evalue=1.0e-10) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.00e-10 | sox:TM7x_00695 |
| S1 (db=HMMPfam db_id=PF00575 from=331 to=402 evalue=1.6e-10 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.60e-10 | sox:TM7x_00695 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=330 to=407 evalue=1.2e-09 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.20e-09 | sox:TM7x_00695 |
| S1 (db=HMMPfam db_id=PF00575 from=273 to=318 evalue=1.7e-08 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.70e-08 | sox:TM7x_00695 |
| S1 (db=HMMPfam db_id=PF00575 from=147 to=221 evalue=3.7e-08 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.70e-08 | sox:TM7x_00695 |
| no description (db=HMMSmart db_id=SM00316 from=59 to=127 evalue=4.9e-07) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 4.90e-07 | sox:TM7x_00695 |
| S1 (db=HMMPfam db_id=PF00575 from=58 to=127 evalue=1.6e-06 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.60e-06 | sox:TM7x_00695 |
| no description (db=HMMSmart db_id=SM00316 from=143 to=223 evalue=9.1e-06) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 9.10e-06 | sox:TM7x_00695 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=58 to=129 evalue=0.00014 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.40e-04 | sox:TM7x_00695 |
| S1 (db=ProfileScan db_id=PS50126 from=61 to=127 evalue=13.789 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.38e+01 | sox:TM7x_00695 |
| S1 (db=ProfileScan db_id=PS50126 from=335 to=405 evalue=14.419 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.44e+01 | sox:TM7x_00695 |
| S1 (db=ProfileScan db_id=PS50126 from=145 to=223 evalue=14.509 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.45e+01 | sox:TM7x_00695 |
| S1 (db=ProfileScan db_id=PS50126 from=240 to=318 evalue=19.054 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.91e+01 | sox:TM7x_00695 |
| RNA binding S1 protein {ECO:0000313|EMBL:EKD58220.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
93.1 | 408.0 | 735 | 4.10e-209 | K1ZRL1_9BACT |
Please be patient. You will receive a progress update momentarily.
