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ACD1_50_29

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: comp(30119..30979)

Top 3 Functional Annotations

Value Algorithm Source
ATP synthase F0 subunit A similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 268.0
  • Bit_score: 177
  • Evalue 4.70e-42
transmembrane_regions (db=TMHMM db_id=tmhmm from=228 to=250) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
transmembrane_regions (db=TMHMM db_id=tmhmm from=152 to=174) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

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Notes

Contig binned based on OD1_iv affiliation, then coverage Jill Banfield (11/15/12)

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 861
ATGTCAGCATCATCAGAACAATTTAATAATGAAAATGCGGTCAATGTGGAAGTTTCTCATGAATCTACTCTCTTCGCTGAGCCTATTTTGCATTTTGAGAATTTCACTATAACTAACTCTCTTTTGATGAGTTGGGTCACGGTTATTGTGCTGGTGACTTTTTTTGTGGCTGCTGGAAAGAAAGCCAAGAAATCAAAGGGTGTGCCGAAAGGAGTGCATAATTTTTTCGAAGTTATTTTGGAGCAAGCTTTGAACATGGCAGACTCTGTGACGGGCGAGCGAAGAAAGACTCTGAAATTTTTGCCTATAGTGTTGGCTCTCTTCCTTTTTATTTTGGTGAGTAACTGGATGGGACTTCTGCCAGGAGTGGGAACAATCGGATTCATTGAAAATGGGGAGCATGGAAAAGTTTTTATTCCGCTTCTTCGCGGAGCAACTGCAGATCTGAACACAACTTTGGCAATCGCACTTTTTTCTGTGGTCATGTCGCATATCTTTGGAGTCATCACGGTTGGGGCATGGAGTCACTTCAACAAGTTTGTGAATCTGAAGGCTATTGCCGCAATTCCAAAGAAATTCAAGAAAGATCCAGCCATTATCATGGTGAATCCTATCAAGATTTTCGTGGGATTGATTGAAGTCATCAGTGAAGTTGCAAAAGTTGCTTCTCTTTCTCTTCGACTTTTTGGAAACATCTTTGCAGGTGAAGTTTTGTTGGCATCCATGATGGCCATTTCGGCTTTTTTGTTGCCGCTGCCGTTCATGTTTTTGGAGTTGATCGTGGGAATAGTTCAGGCATTGGTGTTTGCGATTTTGACGCTGGCGTTTATGAGCATTGCGACTTCAGCCGAGGAACATTAA
PROTEIN sequence
Length: 287
MSASSEQFNNENAVNVEVSHESTLFAEPILHFENFTITNSLLMSWVTVIVLVTFFVAAGKKAKKSKGVPKGVHNFFEVILEQALNMADSVTGERRKTLKFLPIVLALFLFILVSNWMGLLPGVGTIGFIENGEHGKVFIPLLRGATADLNTTLAIALFSVVMSHIFGVITVGAWSHFNKFVNLKAIAAIPKKFKKDPAIIMVNPIKIFVGLIEVISEVAKVASLSLRLFGNIFAGEVLLASMMAISAFLLPLPFMFLELIVGIVQALVFAILTLAFMSIATSAEEH*