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ACD1_56_41 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] (db=KEGG evalue=1.0e-58 bit_score=230.0 identity=48.58 coverage=84.2105263157895) similarity KEGG
DB: KEGG 		48.58 84.21 230 1.00e-58
seg (db=Seg db_id=seg from=227 to=250) iprscan interpro
DB: Seg 		null null null null
seg (db=Seg db_id=seg from=302 to=318) iprscan interpro
DB: Seg 		null null null null
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=19 to=322 evalue=1.3e-109 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr 		null null null 1.30e-109
no description (db=HMMSmart db_id=SM00662 from=19 to=227 evalue=7.5e-72 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMSmart 		null null null 7.50e-72
Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=49 to=171 evalue=3.7e-45 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: superfamily 		null null null 4.20e-45
no description (db=Gene3D db_id=G3DSA:2.170.120.12 from=49 to=170 evalue=9.6e-41 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: Gene3D 		null null null 9.60e-41
RBP11-like subunits of RNA polymerase (db=superfamily db_id=SSF55257 from=5 to=228 evalue=2.0e-26 interpro_id=IPR009025 interpro_description=DNA-directed RNA polymerase, RBP11-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 2.00e-26
RNA_pol_L (db=HMMPfam db_id=PF01193 from=29 to=224 evalue=4.0e-22 interpro_id=IPR011261 interpro_description=DNA-directed RNA polymerase, dimerisation GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 4.00e-22
RNA_pol_A_bac (db=HMMPfam db_id=PF01000 from=58 to=151 evalue=6.1e-21 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 6.10e-21
C-terminal domain of RNA polymerase alpha subunit (db=superfamily db_id=SSF47789 from=254 to=321 evalue=4.6e-11 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 4.60e-11
RNA_pol_A_CTD (db=HMMPfam db_id=PF03118 from=255 to=313 evalue=1.1e-10 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam 		null null null 1.10e-10
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=253 to=322 evalue=3.2e-09) iprscan interpro
DB: Gene3D 		null null null 3.20e-09
RNApol_bact_RpoA (db=HAMAP db_id=MF_00059 from=1 to=322 evalue=29.534 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HAMAP 		null null null 2.95e+01
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] alias=ACD1_C00056G00041,ACDUNK_1203.55625.88G0041,ACDUNK_1203.55625.88_41 id=17354 tax=ACD1 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF90 		100.0 null 617 2.90e-174