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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36

Search features with annotation key words

Displaying items 61-90 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_61
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64804..65907)
DNA (1104bp) protein (368aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZH50_9CLOT rbh
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:CCQ97643.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi rbh
sodium-translocating NADH-quinone reductase subunit F
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_62
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65922..66512)
DNA (591bp) protein (197aa)
Na(+)-translocating NADH-quinone reductase subunit E n=1 Tax=Clostridium ultunense Esp RepID=M1ZLR1_9CLOT rbh
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultun rbh
RnfA-Nqr electron transport subunit
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_63
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66509..67147)
DNA (639bp) protein (213aa)
RnfA-Nqr electron transport subunit n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TT08_ALKMQ
RnfA-Nqr electron transport subunit
RnfA-Nqr electron transport subunit {ECO:0000313|EMBL:ABR49326.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metallire
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_64
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67151..67756)
DNA (606bp) protein (202aa)
Sodium-translocating NADH-quinone reductase subunit C n=1 Tax=Clostridium ultunense Esp RepID=M1ZGR7_9CLOT
Sodium-translocating NADH-quinone reductase subunit C {ECO:0000313|EMBL:CCQ97639.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
sodium-translocating NADH-quinone reductase subunit C
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_65
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67753..68736)
DNA (984bp) protein (328aa)
NQR2 and RnfD family protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZH47_9CLOT rbh
NQR2 and RnfD family protein {ECO:0000313|EMBL:CCQ97638.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
NQR2 and RnfD family protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_66
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69032..70201)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYQ0_CLOA9 rbh
Putative methyltransferase {ECO:0000313|EMBL:EXG83681.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_67
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(70775..71524)
DNA (750bp) protein (250aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi rbh
peptidyl-prolyl cis-trans isomerase, PpiC-type (EC:5.2.1.8)
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Clostridium ultunense Esp RepID=M1Z9E7_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_68
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(71651..71848)
DNA (198bp) protein (66aa)
Cold shock protein n=1 Tax=Clostridium botulinum BKT015925 RepID=F4AAJ6_CLOBO
cold shock protein
Cold-shock protein {ECO:0000313|EMBL:KGN00223.1}; TaxID=1443128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. DC5.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_69
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72090..72536)
DNA (447bp) protein (149aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAA
Methylglyoxal synthase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8ML72_ALKOO
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_70
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72764..73261
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YQX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ92960.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_71
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73289..74041)
DNA (753bp) protein (251aa)
Acyl-ACP thioesterase n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DQC6_9FIRM
acyl-ACP thioesterase
Acyl-ACP thioesterase {ECO:0000313|EMBL:AEF93400.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_72
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(74274..75626)
DNA (1353bp) protein (451aa)
MATE efflux family protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z8B6_9CLOT rbh
MATE efflux family protein {ECO:0000313|EMBL:CCQ94251.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" rbh
MATE efflux family protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_73
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75783..76058)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z5E0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ92984.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_74
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(76174..77190)
DNA (1017bp) protein (339aa)
UPF0324 membrane protein CTC_01844 n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Y1844_CLOTE rbh
hypothetical protein
UPF0324 membrane protein CTC_01844; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (strain Massachusetts / E88).;" rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_75
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

77301..78185
DNA (885bp) protein (295aa)
Transcriptional regulator, LysR family n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AJN6_SEBTE rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACZ06943.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (stra rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_76
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(78246..79616)
DNA (1371bp) protein (457aa)
Transporter id=1711398 bin=GWB2_Clostridiales_37_7 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good + rbh
sodium:neurotransmitter symporter; K03308 neurotransmitter:Na+ symporter, NSS family Tax=GWB2_Clostridiales_37_7_curated rbh
sodium:neurotransmitter symporter
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_77
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(79818..80645)
DNA (828bp) protein (276aa)
Mrp protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXA7_9CLOT rbh
Mrp protein {ECO:0000313|EMBL:EET86096.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;" rbh
Mrp protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_78
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(80696..83908)
DNA (3213bp) protein (1071aa)
Putative Efflux ABC transporter, permease protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EKC6_9CLOT rbh
Putative Efflux ABC transporter, permease protein {ECO:0000313|EMBL:CDG01692.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_79
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83902..84606)
DNA (705bp) protein (235aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y4Y3_9CLOT rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA11697.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source= rbh
ABC transporter
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_80
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(84776..85537)
DNA (762bp) protein (254aa)
MerR family transcriptional regulator n=1 Tax=Anoxybacillus sp. DT3-1 RepID=M5QS82_9BACI rbh
MerR regulatory family protein {ECO:0000313|EMBL:KIE46311.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CD rbh
transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_81
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85690..85998
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EPZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI95076.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_82
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(86051..86737)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM50_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW18217.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_83
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(86739..88217)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM49_ALKOO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABW18216.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_84
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(88452..89132)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YZD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ95950.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
N-acetylmuramoyl-L-alanine amidase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_85
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(89323..92310)
DNA (2988bp) protein (996aa)
Zn-dependent peptidase, insulinase family n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BC22_CLOBO rbh
Zn-dependent peptidase, insulinase family {ECO:0000313|EMBL:EDS77024.1}; TaxID=445337 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botul rbh
zinc-dependent peptidase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_86
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(92447..93589)
DNA (1143bp) protein (381aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridiu rbh
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECR8_9CLOT rbh
histidine kinase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_87
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(93579..94265)
DNA (687bp) protein (229aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5F685_9FIRM rbh
Transcriptional regulator {ECO:0000313|EMBL:KJF27063.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" rbh
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_88
Facklamia hominis, Facklamia, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

94472..94945
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Facklamia hominis CCUG 36813 RepID=K1MHB2_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EKB55384.1}; TaxID=883111 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Facklamia.;" source="Facklamia hominis CCUG 36813.;"
D-proline reductase (dithiol)
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_89
Facklamia languida, Facklamia, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

95018..95206
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Facklamia languida CCUG 37842 RepID=H3NHC3_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EHR38178.1}; TaxID=883113 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Facklamia.;" source="Facklamia languida CCUG 37842.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_36_90
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(95248..97050)
DNA (1803bp) protein (601aa)
DNA mismatch repair protein MutS domain protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SVH4_CLOC7 rbh
DNA mismatch repair protein MutS {ECO:0000313|EMBL:KEZ86699.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.; rbh
DNA mismatch repair protein MutS domain-containing protein
Displaying items 61-90 of 93 in total

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