ggKbase home page

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38

Search features with annotation key words

Displaying items 61-79 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_61
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69971..71563)
DNA (1593bp) protein (531aa)
diguanylate cyclase (EC:2.7.7.65)
Diguanylate cyclase {ECO:0000313|EMBL:AFS77617.1}; EC=2.7.7.65 {ECO:0000313|EMBL:AFS77617.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridi rbh
Diguanylate cyclase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXV9_CLOA9 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_62
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(71873..72151)
DNA (279bp) protein (93aa)
Acetyltransferase n=1 Tax=Clostridium intestinale URNW RepID=U2NPH1_9CLOT
GCN5 family acetyltransferase
GCN5 family acetyltransferase {ECO:0000313|EMBL:AIQ16003.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_63
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72323..72484)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PA51_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB86763.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_64
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72517..73068)
DNA (552bp) protein (184aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K8D6_CLOPA
acetyltransferase, ribosomal protein N-acetylase
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:AGK99437.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_65
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73761..75581)
DNA (1821bp) protein (607aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002D43A03 rbh
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY82842.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Su rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_66
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75571..77376)
DNA (1806bp) protein (602aa)
subtilin transport ATP-binding protein SpaT n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000288DB22 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJU72962.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;" rbh
ABC transporter family protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_67
Streptococcus parasanguinis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(78184..79218)
DNA (1035bp) protein (345aa)
Radical SAM additional 4Fe4S-binding domain protein n=2 Tax=Streptococcus mitis RepID=F9H9B6_STRMT
Radical SAM superfamily protein {ECO:0000313|EMBL:KJU89806.1}; TaxID=1318 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus parasanguini
Radical SAM domain protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_68
unknown

Not on your lists

comp(79208..79486)
DNA (279bp) protein (93aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_69
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81515..82375)
DNA (861bp) protein (287aa)
ATPase AAA n=1 Tax=Bacillus massiliosenegalensis RepID=UPI0002FD5F32 rbh
ATPase {ECO:0000313|EMBL:KAJ53164.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;" rbh
AAA ATPase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_70
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82607..84235)
DNA (1629bp) protein (543aa)
Putative ATP synthase F0, A subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PWK7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EET86360.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;" rbh
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_71
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(84236..85015)
DNA (780bp) protein (260aa)
ABC transporter related protein n=1 Tax=Clostridium ultunense Esp RepID=M1YRP8_9CLOT rbh
ABC transporter related protein {ECO:0000313|EMBL:CCQ93205.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp. rbh
ABC transporter ATPase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_72
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(85110..85649)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N3L6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB89469.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
ArsR family transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_73
unknown

Not on your lists

comp(85661..86035)
DNA (375bp) protein (125aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_74
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86218..87219
DNA (1002bp) protein (334aa)
Leucyl aminopeptidase n=1 Tax=Paenibacillus alvei TS-15 RepID=S9SNE1_PAEAL
Uncharacterized protein {ECO:0000313|EMBL:EYE87215.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.
leucyl aminopeptidase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_75
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87278..88567)
DNA (1290bp) protein (430aa)
Aspartate--tRNA ligase AspS {ECO:0000313|EMBL:CEQ16925.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CEQ16925.1};; EC=6.1.1.22 {ECO:0000313|EMBL:CEQ16925.1};; Aspartate--tRNA ligase AspS,Asparagine--tRNA ligase,a rbh
aspS3; aspartate--tRNA ligase AspS (EC:6.1.1.12)
Aspartate--tRNA(Asn) ligase n=2 Tax=Clostridium sordellii RepID=T0CRU8_CLOSO rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_76
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(89119..90219)
DNA (1101bp) protein (367aa)
4Fe-4S single cluster domain protein {ECO:0000313|EMBL:KIE44685.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentine rbh
Radical SAM domain protein id=4593945 bin=GWF2_OP9_related_35_9 species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria) rbh
radical SAM domain-containing protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_77
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(90238..90882)
DNA (645bp) protein (215aa)
Transcriptional regulator n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KFQ2_CLOPA
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGK99384.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_78
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

91057..92940
DNA (1884bp) protein (628aa)
ABC transporter related n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJ50_ALKOO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS48972.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;" rbh
ABC transporter
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_38_79
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(93029..93799)
DNA (771bp) protein (257aa)
AP endonuclease, family 2 n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CZY4_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:ERI89643.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
xylose isomerase domain-containing protein TIM barrel
Displaying items 61-79 of 79 in total

View Taxonomy