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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67

Search features with annotation key words

Displaying items 31-60 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_31
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32318..32851
DNA (534bp) protein (178aa)
RNA polymerase sigma factor n=1 Tax=Clostridium tetani 12124569 RepID=U6EVK1_CLOTA
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:CDI48718.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_32
unknown

Not on your lists

32841..33149
DNA (309bp) protein (103aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_33
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33139..33531
DNA (393bp) protein (131aa)
Double zinc ribbon n=1 Tax=Clostridium tetani 12124569 RepID=U6EWW4_CLOTA
Double zinc ribbon
Double zinc ribbon {ECO:0000313|EMBL:CDI48720.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_34
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33628..34869
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZX6_CLOA9 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS79348.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_35
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35082..36257
DNA (1176bp) protein (392aa)
potassium transporter n=1 Tax=Clostridium tunisiense RepID=UPI0002FEE08E rbh
Potassium transporter {ECO:0000313|EMBL:EQB87411.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;" rbh
Na(+)/H(+) antiporter
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_36
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36323..36523)
DNA (201bp) protein (67aa)
Transcriptional regulator, XRE family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8ML18_ALKOO
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABW17835.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlan
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_37
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36580..37170)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TME4_ALKMQ
Nucleotidase {ECO:0000313|EMBL:KJF27686.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_38
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37384..38988
DNA (1605bp) protein (535aa)
PucR C-terminal helix-turn-helix domain protein n=2 Tax=Clostridium sordellii RepID=T0DSW8_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:KJF26719.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
sugar diacid utilization regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_39
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39196..39903
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJR5_9FIRM
membrane protein
Membrane protein {ECO:0000313|EMBL:AIZ36195.1}; TaxID=33033 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas micra.;"
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_40
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

39922..40587
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Treponema denticola H-22 RepID=M2BQX0_TREDN
Uncharacterized protein {ECO:0000313|EMBL:EMB31685.1}; TaxID=999432 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola H-22.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_41
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40718..41902
DNA (1185bp) protein (395aa)
Peptidase, M20D family n=1 Tax=Fusobacterium nucleatum subsp. vincentii 3_1_27 RepID=D6LB77_FUSNV
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:KJF26722.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
amidohydrolase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_42
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42108..43862
DNA (1755bp) protein (585aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EBN6_9FIRM rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI91887.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540. rbh
antibiotic ABC transporter ATPase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_43
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43852..45594
DNA (1743bp) protein (581aa)
ABC transporter permease n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E305A0 rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI91888.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540. rbh
ABC transporter permease
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_44
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45792..47759
DNA (1968bp) protein (656aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s rbh
Sensory transduction protein kinase n=1 Tax=Clostridium tetani 12124569 RepID=U6F1C7_CLOTA rbh
sensory transduction protein kinase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_45
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47776..49131
DNA (1356bp) protein (452aa)
Transcriptional response regulator n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q891P7_CLOTE rbh
transcriptional response regulator
Transcriptional response regulator {ECO:0000313|EMBL:AAO36798.1}; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (stra rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_46
Jonquetella anthropi, Jonquetella, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

49322..50362
DNA (1041bp) protein (347aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=2 Tax=Jonquetella RepID=H0UJ42_9BACT rbh
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family {ECO:0000313|EMBL:EHM13869.1}; Flags: Precursor;; TaxID=885272 species="Bacteria; Synergistetes; Synergistia; Synergista rbh
TRAP dicarboxylate family transporter subunit DctP
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_47
Bhargavaea cecembensis, Bhargavaea, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

50396..50872
DNA (477bp) protein (159aa)
2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM n=1 Tax=Bhargavaea cecembensis DSE10 RepID=M7NHD6_9BACL
2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM {ECO:0000313|EMBL:EMR06601.1}; TaxID=1235279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Bhargavaea.;" source
TRAP-type C4-dicarboxylate transport system, small permease component
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_48
Jonquetella anthropi, Jonquetella, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

50869..52143
DNA (1275bp) protein (425aa)
TRAP transporter, DctM subunit n=2 Tax=Jonquetella RepID=H0UJ44_9BACT rbh
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EHM13871.1}; Flags: Precursor;; TaxID=885272 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Jonquetella.;" source="Jonqu rbh
TRAP C4-dicarboxylate transport system permease DctM
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_49
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52391..52885
DNA (495bp) protein (165aa)
Acyl-CoA thioester hydrolase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I284_9CLOT
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:ETA79988.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1
acyl-CoA hydrolase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_50
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52946..54067
DNA (1122bp) protein (374aa)
Chromate transporter n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7ICE5_9CLOT rbh
Chromate transporter {ECO:0000313|EMBL:ETA82542.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;" rbh
chromate transport protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_51
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54086..54364
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0MVW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB86749.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_52
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54413..55081)
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Dehalobacter RepID=K4KU95_9FIRM rbh
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15 rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_53
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55098..56384)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=3 Tax=Dehalobacter RepID=K4KX77_9FIRM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB20506.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;" rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_54
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56399..57319)
DNA (921bp) protein (307aa)
alpha/beta hydrolase n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002E40881 rbh
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AHF10810.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;" rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_55
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57455..57841)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZHA4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ98241.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_56
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57954..58217)
DNA (264bp) protein (88aa)
YCII-related n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIA9_ALKOO
YCII-like protein
YCII-related {ECO:0000313|EMBL:ABW19541.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clos
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_57
Defluviitoga tunisiensis, Defluviitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

58435..58989
DNA (555bp) protein (185aa)
DJ-1 family protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZFE1_9CLOT
DJ-1 family protein {ECO:0000313|EMBL:CEP77825.1}; TaxID=1006576 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Defluviitoga.;" source="Defluviitoga tunisiensis.;"
DJ-1 family protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_58
unknown

Not on your lists

59013..59117
DNA (105bp) protein (35aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_59
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59211..60452
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFS5_ALKOO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW17714.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_67_60
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60456..61157
DNA (702bp) protein (234aa)
Cobalamin synthesis protein P47K n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFS6_ALKOO rbh
cobalamin synthesis protein P47K
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:ABW17715.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii ( rbh
Displaying items 31-60 of 67 in total

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