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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76

Search features with annotation key words

Displaying items 61-85 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_61
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61947..62672
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZLZ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ98072.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
GntR family transcriptional regulator
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_62
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62821..63306)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZGP1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ92952.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_63
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63446..64117
DNA (672bp) protein (224aa)
rluC2; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.23)
Ribosomal large subunit pseudouridine synthase C {ECO:0000313|EMBL:AFS79540.1}; EC=5.4.99.23 {ECO:0000313|EMBL:AFS79540.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Got
Ribosomal large subunit pseudouridine synthase C n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B3S3_CLOA9
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_64
Bacillus akibai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(64181..65650)
DNA (1470bp) protein (490aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2ELS5_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:GAE34365.1}; TaxID=1236973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus akibai (strain ATCC 43226 / DSM 21942 rbh
methyl-accepting chemotaxis sensory transducer
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_65
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(65739..67907)
DNA (2169bp) protein (723aa)
NADH:flavin oxidoreductase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KU29_METHD rbh
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase {ECO:0000313|EMBL:AGB48626.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanom rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_66
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67930..68373)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MSP1_9THEO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM77818.1}; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanae
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_67
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68385..69671)
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MSP2_9THEO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM77819.1}; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanae rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_68
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

69889..71256
DNA (1368bp) protein (456aa)
Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A4B7_DESDJ rbh
transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AFL98801.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_69
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(71522..72403)
DNA (882bp) protein (294aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256| rbh
thrB; homoserine kinase ThrB (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Clostridium ultunense Esp RepID=M1ZL77_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_70
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72396..73880)
DNA (1485bp) protein (495aa)
Threonine synthase {ECO:0000313|EMBL:CCQ96721.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CCQ96721.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour rbh
thrC; threonine synthase ThrC (EC:4.2.3.1)
Threonine synthase n=1 Tax=Clostridium ultunense Esp RepID=M1ZDS3_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_71
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73894..75108)
DNA (1215bp) protein (405aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphil rbh
Homoserine dehydrogenase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIU0_ALKOO rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_72
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75109..76446)
DNA (1338bp) protein (446aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc rbh
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Clostridium ultunense Esp RepID=M1ZF50_9CLOT rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_73
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(76930..78681)
DNA (1752bp) protein (584aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI0003733C23 rbh
Peptidase, M56 family protein {ECO:0000313|EMBL:EMS72185.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termiti rbh
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_74
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(78692..79051)
DNA (360bp) protein (120aa)
Transcriptional repressor, CopY family n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SWI7_SYNGF
CopY family transcriptional regulator
Transcriptional repressor, CopY family {ECO:0000313|EMBL:ADY55753.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulu
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_75
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(79253..80107)
DNA (855bp) protein (285aa)
Catechol-2,3-dioxygenase {ECO:0000313|EMBL:CCQ93809.1}; EC=1.13.11.2 {ECO:0000313|EMBL:CCQ93809.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium rbh
Catechol-2,3-dioxygenase n=1 Tax=Clostridium ultunense Esp RepID=M1Z7V3_9CLOT rbh
glyoxalase/bleomycin resistance protein/dioxygenase
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_76
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(80158..80838)
DNA (681bp) protein (227aa)
CAAX amino terminal protease family protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EXU3_CLOTA rbh
CAAX amino terminal protease family protein
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CDI49523.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium te rbh
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_77
unknown

Not on your lists

comp(81101..81343)
DNA (243bp) protein (81aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_78
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

81775..82488
DNA (714bp) protein (238aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KGM5_9FIRM rbh
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67418.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source=" rbh
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_79
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

82481..84043
DNA (1563bp) protein (521aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; rbh
ATP-binding region ATPase domain protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DVE4_DESRL rbh
ATP-binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_80
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(84358..85185)
DNA (828bp) protein (276aa)
transcriptional regulator n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F657
Transcription activator effector binding protein {ECO:0000313|EMBL:KAJ48931.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
transcription activator effector binding protein
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_81
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(85388..86281)
DNA (894bp) protein (298aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0C0_CLOCD
diguanylate cyclase domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AEV66927.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_82
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86385..86630
DNA (246bp) protein (82aa)
Helix-turn-helix protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0B9_CLOCD
Helix-turn-helix protein
Helix-turn-helix protein {ECO:0000313|EMBL:AEV66926.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (st
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_83
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87310..88044)
DNA (735bp) protein (245aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KLN9_CLOPH
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ABX42783.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain
NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_84
unknown

Not on your lists

comp(88111..88209)
DNA (99bp) protein (33aa)

This feature has no annotations

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_76_85
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(88543..89385)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XQ47_9CLOT rbh
Beta-lactamase class A {ECO:0000313|EMBL:EXG83529.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;" rbh
beta-lactamase
Displaying items 61-85 of 85 in total

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