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NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_13_59

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: 66411..67112

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azor similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 230.0
  • Bit_score: 324
  • Evalue 1.60e-85
  • rbh
RNA polymerase sigma factor id=2200895 bin=GWB2_Clostridiales_37_7 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 232.0
  • Bit_score: 317
  • Evalue 1.10e-83
  • rbh
RNA polymerase sigma 28 subunit SigK similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 226.0
  • Bit_score: 309
  • Evalue 8.40e-82

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Taxonomy

Caloranaerobacter azorensis → Caloranaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 702
ATGAAAAATGCAATTCTATTAATTTTTAGTATAATATTAAGGCCGTTTGTAATCCTCTGTGGATATATGATAAATTCTAATTCTTTTCCAAAGCCACTTTCTAGGGAAGATGAAGAGAAGTATTTAAAGCTTTATTCAGAAGGAAATGAAGATGCAAGAAATATACTAATAGAAAGAAACCTAAGATTAGTTGCGCATATAGTGAAAAAATATAGTAATACAGGAAAAGAAACAGAAGATTTGATTTCTATTGGCACAATAGGTTTAATCAAAGCAATATCTACTTATAATCCAGCTAAAGGTACAAGACTAGCTACATATGCTGCAAGATGTATAGAAAATGAAATTCTAATGACTATAAGATCGACTAAAAAAACTAAAGTAGAGTTATCTTTACATGAACCTATTGGTATGGATAAAGAAGGCAATGAAATAAATTTACTAGATATTTTAGGGTCAGATGTAGATGAAATATTAGATGAGGTAGATTTAAAATTACAAATAAAAAAATTATATAAGGCAATAAATCAGGTTTTAAAGGATAGAGAGAAAGTCATTATTGAGTTGAGATATGGTCTGATAGATGGAAGTTGTAAGACACAAAGAGAAATTGCTGCCATGCTAGGTATATCTAGATCTTATGTGTCAAGAATCGAAACAAGAGCACTAAACAAATTAAATAAAACTTTAATGAGTAAATAA
PROTEIN sequence
Length: 234
MKNAILLIFSIILRPFVILCGYMINSNSFPKPLSREDEEKYLKLYSEGNEDARNILIERNLRLVAHIVKKYSNTGKETEDLISIGTIGLIKAISTYNPAKGTRLATYAARCIENEILMTIRSTKKTKVELSLHEPIGMDKEGNEINLLDILGSDVDEILDEVDLKLQIKKLYKAINQVLKDREKVIIELRYGLIDGSCKTQREIAAMLGISRSYVSRIETRALNKLNKTLMSK*