ggKbase home page

NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_scaffold_52_37

Organism: NECEvent2014_3_5_Clostridium_ultunense-rel_31_38_plum

partial RP 49 / 55 MC: 1 BSCG 0 / 51 ASCG 15 / 38 MC: 5
Location: comp(44790..45482)

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUU2_CLOBO similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 228.0
  • Bit_score: 321
  • Evalue 5.70e-85
  • rbh
Membrane protein {ECO:0000313|EMBL:KGJ48279.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 227.0
  • Bit_score: 322
  • Evalue 6.20e-85
  • rbh
twin-arginine translocating C-subunit similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 228.0
  • Bit_score: 321
  • Evalue 2.80e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. NCR → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 693
ATGAATACAACAAATACAATAAACTTTAGTGATATTTTCAAATCAAGTTTTTTAAATAAAGTGGGATCCATATCAGCTGTCGATATGATTATAGCATTAGGACTTGCTTTTGTCTTAGGTTTATTTATTATGACAGTCTATAAAAAAACTTTTAAAGGAGTTATGTATTCCCCAAGTTTTGGTGTAGCCCTTATGTCTTTAACACTTATTACAACTTTAATTATATTGGCTGTTACTTCCAACGTTGTACTATCTCTTGGTATGGTTGGTGCATTGTCAATAGTTCGTTTTAGATCTGCAATAAAAGAACCAATTGATATAGCATTTTTATTCTGGTCAATTTCTGGAGGGATAGTGTTAGGTGCTGGTTTAATTCCATTAGCTATATTCGGTTCAATATTCATAGGTATTGTAATGGTATTATTTGTAAATAAAAAGTCAAATGAAACTCCATATATAATGGTAGTTAATTATGAAGATAATGAATGCGAGAAAGATATCTTAGACATCATAAATAATAAGGTACAAAAATATTTAATAAAATCTAAGACTGCCTCAAAATATAGCGGGATAGAGCTTACTGTTGAGATTAGATTAAAAGAAATCACCACTGATTTTATAAATGAGTTATCTAGTCTTAAAGGAGTTTCTAATGTAGTTATGGTTAGTTATAATGGGGATTATATGGAATAA
PROTEIN sequence
Length: 231
MNTTNTINFSDIFKSSFLNKVGSISAVDMIIALGLAFVLGLFIMTVYKKTFKGVMYSPSFGVALMSLTLITTLIILAVTSNVVLSLGMVGALSIVRFRSAIKEPIDIAFLFWSISGGIVLGAGLIPLAIFGSIFIGIVMVLFVNKKSNETPYIMVVNYEDNECEKDILDIINNKVQKYLIKSKTASKYSGIELTVEIRLKEITTDFINELSSLKGVSNVVMVSYNGDYME*