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NECEvent2014_4_3_Actinomyces_59_538_scaffold_9_128

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(144898..145146)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator WhiB n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X8I0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 82.0
  • Bit_score: 160
  • Evalue 6.10e-37
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F03 similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 82.0
  • Bit_score: 160
  • Evalue 8.50e-37
Transcription factor WhiB similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 82.0
  • Bit_score: 139
  • Evalue 4.10e-31

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Taxonomy

Actinomyces cardiffensis → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGGACTGGCGGAGTAAAGCAGCCTGCTTAAGTGTTGACCCGGAGCTGTTTTTCCCAATCGGCAATACTGGTCCAGCCCTGACACAAGCTGCGGAAGCCAAAGCTGTATGCCATAACTGCCCCGTTGAGACCGTGTGTCTGCAGTGGGCAATGGACAACAACCAGGATTCCGGAGTGTGGGGCGGTCTGAGCGAAGAAGAGCGCCGCTCAATGAAACGCCGCGCCGCACGTGCACGCCGCGCTTCCTGA
PROTEIN sequence
Length: 83
MDWRSKAACLSVDPELFFPIGNTGPALTQAAEAKAVCHNCPVETVCLQWAMDNNQDSGVWGGLSEEERRSMKRRAARARRAS*