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NECEvent2014_4_3_Actinomyces_59_538_scaffold_19_27

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(30852..31421)

Top 3 Functional Annotations

Value Algorithm Source
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EJG15656.1}; EC=2.1.1.- {ECO:0000313|EMBL:EJG15656.1};; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomy similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 185.0
  • Bit_score: 204
  • Evalue 1.20e-49
RNA methyltransferase, RsmD family n=1 Tax=Actinomyces sp. ICM47 RepID=J0SNC8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 185.0
  • Bit_score: 204
  • Evalue 8.40e-50
methyltransferase similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 180.0
  • Bit_score: 177
  • Evalue 4.10e-42

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Taxonomy

Actinomyces sp. ICM47 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGACACGGATTGTGGCCGGAGAGGCAAAAGGGCGCGTACTGAAGGTGCCTGCACGCGGAACGCGGCCCACATCGGAACGCGTGCGCGAAGCACTGTTCTCACGCCTGGATGCCATGAATATGTGCGATGGGGTAGCGGTACTGGACCTGTACGCAGGGTCGGGAGCGCTGGCCTTCGAGGCCCTCTCACGCGGAGCAGCCCGGGCTGACATGGTGGACAGTTCACGTCAGGCTGCCCGCGCCATGAGTACGAACGCAGCGATGATGGGCTATGAAGATCGCACGCGCATCCACACCCTCGACGCGCTGGCGTTTGTGCAGTCAGGCCGCGTGAGCAGCCCGGTTGACCTGGTGTTCGTGGACCCTCCCTATGATTTGGCACAAAATGCGCTCGCGGCCGTGCTGGCCGGACTCGCGGCGCACCTGTCGCCAGACGCCCTCGTCATTGTGGAGCGATCAACCCGCTCACAGGCGCCAGACCTGCCGGATGGCCTGGTGTGCGAAGATCACCGTCACTGGGGTGAGACTGCCGCGTGGTTCATTGGCCGTGCCGATAGGGTGGAGTCATGA
PROTEIN sequence
Length: 190
MTRIVAGEAKGRVLKVPARGTRPTSERVREALFSRLDAMNMCDGVAVLDLYAGSGALAFEALSRGAARADMVDSSRQAARAMSTNAAMMGYEDRTRIHTLDALAFVQSGRVSSPVDLVFVDPPYDLAQNALAAVLAGLAAHLSPDALVIVERSTRSQAPDLPDGLVCEDHRHWGETAAWFIGRADRVES*