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NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_7_297

Organism: NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_plum

partial RP 52 / 55 BSCG 0 / 51 ASCG 12 / 38 MC: 1
Location: comp(302558..303442)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veill similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 294.0
  • Bit_score: 566
  • Evalue 2.40e-158
  • rbh
UPI0003D5E1A5 related cluster n=1 Tax=unknown RepID=UPI0003D5E1A5 similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 294.0
  • Bit_score: 566
  • Evalue 1.70e-158
  • rbh
cas1; CRISPR-associated Cas1 similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 294.0
  • Bit_score: 270
  • Evalue 7.10e-70

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Taxonomy

Negativicoccus succinicivorans → Negativicoccus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 885
ATGAGCTGGCGCACAGTTGTCATCACGAAACCGGCCAAACTCGAATTGCGTTTGAACTACTTGGTTGTTCGCAGCATCGACCATGTGGAAAAAATAAGCTTGACGGAATTGGGAGCATTGGTAATTGAAACACTGCAGGTATCGATTACCGGCGCACTCATCAGCGCGCTTTTAGCGCAAGAAATCAGGATTATCATTTGCGATGAGCATCATGATCCGCAAGGGGAAATCCTACCTTATTACGGATGCCATGACTGCTCTCGCAAAATACAGATGCAAATGGGTTGGAAGGAGACGACAAAGAAACTTTTATGGCAACAGATTGTTCGACAAAAGATTATGAATCAACGGAAAACATTGGCATATTTTTGTTCGGATGCGACCGATGTGGTGGCGAAGCTGGCGCAGTATGAGACGCAAGTTGAAATCGGCGACGCCACTCATCGGGAAAGTCTCGCCGCCAAAGAATACTTTCCCGCGCTCTTGGGAAAAGGATTTACGCGCGCGGCCGAGACGGCGCAAAATGCCGCATTGAACTACGGCTACCAAATTATCATTTCCATTTTTTCCCGTGAAATCAAAATTGCCGGTTACCTTACCGAATTGGGGATTTTTCATGACAGTCAGCATAATCATTTCAATTTGTCATCCGATCTTATGGAGCCGTGGCGACCGGTTGTAGACGCATTTGTCAGAGAAAAAGAATGGGAACAATTTGCCGTGGAGGAAAAACATATGATGCAACGTCTCGTGACGCAGGAAGTAACCTTTCGCGGGCAAAAGCAAAGCGTGCCTAACGCTATTCGCATGTACGTGAATTCGGTGTTTCAGGCGTTGAATCATAATGACATTTCGCAAGTGCATTTTTTCAACCATGAGTTATAG
PROTEIN sequence
Length: 295
MSWRTVVITKPAKLELRLNYLVVRSIDHVEKISLTELGALVIETLQVSITGALISALLAQEIRIIICDEHHDPQGEILPYYGCHDCSRKIQMQMGWKETTKKLLWQQIVRQKIMNQRKTLAYFCSDATDVVAKLAQYETQVEIGDATHRESLAAKEYFPALLGKGFTRAAETAQNAALNYGYQIIISIFSREIKIAGYLTELGIFHDSQHNHFNLSSDLMEPWRPVVDAFVREKEWEQFAVEEKHMMQRLVTQEVTFRGQKQSVPNAIRMYVNSVFQALNHNDISQVHFFNHEL*