ggKbase home page

NECEvent2014_6_6_Clostridiales_50_23_scaffold_34_5

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1710..2147)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Clostridium RepID=C0CY93_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 145.0
  • Bit_score: 280
  • Evalue 9.30e-73
Uncharacterized protein {ECO:0000313|EMBL:EGA92927.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 145.0
  • Bit_score: 280
  • Evalue 1.30e-72
DNA-directed RNA polymerase specialized sigma subunit similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 145.0
  • Bit_score: 274
  • Evalue 1.90e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] symbiosum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 438
ATGGAGCTATCTTCTTCCGACAAGGAAAGAATACAACATCAGTACGACGCATTAGCAAAGAAAACTTTGGTTGGCGAAGCGAAAAGCCACCGCCGCACTCTTGCGAAACGCGCAGCACGCGAAGTACCTTTTTCGGATTTGAGCGAAAGCGAACTCGCGCAGCTTTTCACAACGGACGAATACAAAAGCGATTATTTCCGTTTTCAAGTGTCCGGCTTTGATGTACTCGTCAAAAATGAACTGCTTGCCGAAGCCCTTAACGCTTTGCCCGAAAGGAAACGCGACATTATCCTTTTGTCCTACTTCTTGGACATGAGCGACGCGGAAATTGCTGAACTGCTGAATGTTGTACGCACGACGGTTTTCCGGCACAGGAAATCCGCGCTTGCGAAAATCAAACAGTATTTGGAGGGAAAAGCAGATGATGAATACCGTTAG
PROTEIN sequence
Length: 146
MELSSSDKERIQHQYDALAKKTLVGEAKSHRRTLAKRAAREVPFSDLSESELAQLFTTDEYKSDYFRFQVSGFDVLVKNELLAEALNALPERKRDIILLSYFLDMSDAEIAELLNVVRTTVFRHRKSALAKIKQYLEGKADDEYR*